Query= MSMg01no322_e13.b1 MSMg01no322_e13.b1 CHROMAT_FILE:
MSMg01no322_e13.b1 PHD_FILE: MSMg01no322_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:13 2005
(519 letters)
>mm_chr7_25627545_25628461
Length = 917
Score = 895 bits (463), Expect = 0.0
Identities = 500/513 (97%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactctgtataccaagctggcctccaactttcagagatccacctccctcccctc 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactctgtagaccaagctggcctccaactttcagagatccacctccctcccctc 263
Query: 64 tgcctcccaaattctggaattaaaggcttgtgccaccacacccagatgacttaaaaagga 123
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 264 tgcctcccaaattctggaattaaaggcttgtgccaccacatccagatgacttaaaaagg- 322
Query: 124 aaaaaaaaaagttataattcctactgccaccattctatacatcaggatgtaagggctgcc 183
|||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||
Sbjct: 323 -aaaaaaaaagttctaattcctactgtcaccattctatacatcgggatgtaagggctgcc 381
Query: 184 tgtttccctacttggagctgtttgcttgcttgttgcttgtagacctgtgctctctggatg 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 382 tgtttccctacttggagctgtttgcttgcttgttgcttgtagacccgtgctctctggatg 441
Query: 244 ctgacaggctggctgcagtcctctccaatgagactgatttggtttctccaaacacgacat 303
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 ctgacaggctggctgcagtcctctccaatgagactgagttggtttctccaaacacgacat 501
Query: 304 ttcttttcctatttgagtaagacctgggcttgatgggaggcatcccactaaggacattcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttcttttcctatttgagtaagacctgggcttgatgggaggcatcccactaaggacattcc 561
Query: 364 tgctgcgttacacaccaatccaggaacttgatttgctggacaaaaacttaactctattca 423
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 562 tgctgcgttacacaggaatccaggaacttgatttgttggacaaaaacttaactctattca 621
Query: 424 taactttggcccatttatacaaaataccattgtacccaagaccttcggtccgttagactg 483
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 622 taactttggcccatttatacaaaataccattgtacccaagaccttcggtccattagactg 681
Query: 484 ataacaactgccactaataaattgtgagtttat 516
|||||||||||||||||||||||||||||||||
Sbjct: 682 ataacaactgccactaataaattgtgagtttat 714
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 917
Length adjustment: 10
Effective length of query: 509
Effective length of database: 907
Effective search space: 461663
Effective search space used: 461663
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_e13.g1 MSMg01no322_e13.g1 CHROMAT_FILE:
MSMg01no322_e13.g1 PHD_FILE: MSMg01no322_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:13 2005
(345 letters)
>mm_chr7_25787842_25788586
Length = 745
Score = 611 bits (316), Expect = e-179
Identities = 341/358 (95%), Gaps = 14/358 (3%)
Strand = Plus / Minus
Query: 1 agttcagacctaaggcttttttttcttgctcttccgtaccccaaatctaccccctcccaa 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 470 agttcagacctaaggcttttttttcttgctcttccataccccaaatctaccccctcccaa 411
Query: 61 ttcctacttattcctcgagggcagagcatgcccatgcccgttcaagacagtctgcagtac 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 410 ttcctacttattcctcgagggcagagcatgcccatgcccgttcaagactgtctgcagtac 351
Query: 121 acagctgtctgcaggagagaagtcaggttcatatcttgtccatggagtctcttgggaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 acagctgtctgcaggagagaagtcaggttcatatcttgtccatggagtctcttgggaatg 291
Query: 181 actacttacaggtggcacactgcctcccatgggagagcctttgtcccatgtcatttggag 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 actacttacatgtggcacactgcctcccatgggagagcctttgtcccatgtcatttggag 231
Query: 241 tgccctctcctctcatgatttgcctggctc--------------tgtgtgtgtgtgtgtg 286
|||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 230 tgccctctcctctcatgatttgcctggctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 171
Query: 287 tgtgtgtgtgtgtggtctcccaagatcgtctgagtcctttgagacatccacagtctca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgtgtgtgtgtgtggtctcccaagatcgtctgagtcctttgagacatccacagtctca 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
