Query= MSMg01no322_i15.b1 MSMg01no322_i15.b1 CHROMAT_FILE:
MSMg01no322_i15.b1 PHD_FILE: MSMg01no322_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:31 2005
(547 letters)
>mm_chr7_38744977_38745924
Length = 948
Score = 812 bits (420), Expect = 0.0
Identities = 459/478 (96%), Gaps = 12/478 (2%)
Strand = Plus / Minus
Query: 5 gaattcttgcttattc-aagtgaaattatgtcctagaaaagtcgcagctgtaactagagc 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaattcttgcttaaacaaagtgaaattatgtcctagaaaagtcgcagctgtaactagagc 414
Query: 64 agtgccactgtcacagttttatgaaatacatgctttaatggtaaaatggtatgctagggt 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 agtgccactgtcagagttttatgaaatacatgctttaatggtaaaatggtatgctagggt 354
Query: 124 ccatgctagttaatggataatgcagaacaggggactgaattggaaaggctgcctaaaaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ccatgctagttaatggataatgcagaacaggggactgaattggaaaggctgcctaaaaat 294
Query: 184 ataatagctcggtttttctagccgttgttgatcatctgtacacatattttgtacttaaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ataatagctcggtttttctagccgttgttgatcatctgtacacatattttgtacttaaaa 234
Query: 244 accacttttctttccaatcacctactctc------tttttattatcccatcacaccgact 297
||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 233 accacttttctttccaatcacctactctcaaccag-----actatcccatcacaccgact 179
Query: 298 ctaggcacaccctgctccttctccctatgagaggcgtcctgtgctaacctcctcctgatg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 ctaggcacaccctgctccttctccctatgagaggcgtcctgtgctaacctcctcctgatg 119
Query: 358 caagcctccttgcccaactgttggatcttcagatgtgtaacttaagtgtgctgttattaa 417
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 caagcctccttgtggaactgttggatcttcagatgtgtaacttaagtgtgctgttattaa 59
Query: 418 acactttctatgttcatgaacttattttgagcctgctttatctatttgtgtacttctt 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 acactttctatgttcatgaacttattttgagcctgctttatctatttgtgtacttctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 948
Length adjustment: 10
Effective length of query: 537
Effective length of database: 938
Effective search space: 503706
Effective search space used: 503706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no322_i15.g1 MSMg01no322_i15.g1 CHROMAT_FILE:
MSMg01no322_i15.g1 PHD_FILE: MSMg01no322_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:31 2005
(335 letters)
>mm_chr7_38588454_38589188
Length = 735
Score = 640 bits (331), Expect = 0.0
Identities = 334/335 (99%)
Strand = Plus / Plus
Query: 1 catagaattgtgaaaaaatcaaatatttctcagttttaaaaagacgaagccaaaaagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catagaattgtgaaaaaatcaaatatttctcagttttaaaaagacgaagccaaaaagtac 260
Query: 61 attacaagttaacatgaaggaaaaaaaaaacaggatatcagttgagttaagacaatgtgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attacaagttaacatgaaggaaaaaaaaaacaggatatcagttgagttaagacaatgtgt 320
Query: 121 acaagcaagtgtatagctatgagtgcttgtcttttaaaactgttaactaagaaagagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaagcaagtgtatagctatgagtgcttgtcttttaaaactgttaactaagaaagagggc 380
Query: 181 tagagagatgttaagagtgcttgggttccgttcatagcatccacctgacagctcactact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagagagatgttaagagtgcttgggttccgttcatagcatccacctgacagctcactact 440
Query: 241 gttggtaattccagtcccaagggatctgatgccctcctctggcctccatcaacaccagga 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttggtaactccagtcccaagggatctgatgccctcctctggcctccatcaacaccagga 500
Query: 301 acatgtatggagaaaggggggagggggaggaggtg 335
|||||||||||||||||||||||||||||||||||
Sbjct: 501 acatgtatggagaaaggggggagggggaggaggtg 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
