Query= MSMg01no323_p08.b1 MSMg01no323_p08.b1 CHROMAT_FILE:
MSMg01no323_p08.b1 PHD_FILE: MSMg01no323_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:06 2005
(381 letters)
>mm_chr7_144900175_144900955
Length = 781
Score = 648 bits (335), Expect = 0.0
Identities = 370/383 (96%), Gaps = 4/383 (1%)
Strand = Plus / Minus
Query: 1 ttgaagaaggcttcttttgcctggaagctagatg--tttccaactcccattggcttctac 58
||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||||
Sbjct: 581 ttgaagaaggcttcttttgcctggaagagagatgcctt--caactcccatttgcttctac 524
Query: 59 tccagagtttgtctttaactacatctgttaaaaatgggatcaatcagcttcagcccctag 118
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 523 tccagagtttgtctctaactacatctgttaaaaatgggatcactcagcttcagcccctag 464
Query: 119 ctgccgaggggcagttaccttgtttttaaacaatgtcaaggggacatcatctgagagaat 178
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 463 ctgccgaggggcagttaccttgtttttaaacaatgtcaaggggacatcacctgagagaat 404
Query: 179 actatgctggagatgccacttcttccagggtcatggaagaagagagagaagtccccacca 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 accatgctggagatgccacttcttccagggtcatggaagaagagagagaagtccccacca 344
Query: 239 gcctcctatgagatctacgtgtgcacctcctgctgatgtaggaaaaaagttcatgtcact 298
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gcctcctatgagatctacatgtgcacctcctgctgatgtaggaaaaaagttcatgtcact 284
Query: 299 gtgcaggctgatagcatgagctgctgtgtaaataatgtgctcagggttagagagaaatgt 358
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 283 gtgcaggctgatagcatgagctgctgtgtaaataatgtgctcagggttagagaggaatgt 224
Query: 359 gcagggaggattttgcatctcag 381
|||||||||||||||||||||||
Sbjct: 223 gcagggaggattttgcatctcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 781
Length adjustment: 9
Effective length of query: 372
Effective length of database: 772
Effective search space: 287184
Effective search space used: 287184
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_p08.g1 MSMg01no323_p08.g1 CHROMAT_FILE:
MSMg01no323_p08.g1 PHD_FILE: MSMg01no323_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:06 2005
(696 letters)
>mm_chr7_144741045_144742140
Length = 1096
Score = 1323 bits (684), Expect = 0.0
Identities = 693/696 (99%)
Strand = Plus / Plus
Query: 1 catgtgctgcaaggggtagttcctatcccaggagggttaaggctgccttgctttcaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catgtgctgcaaggggtagttcctatcccaggagggttaaggctgccttgctttcaagtc 260
Query: 61 tgagttgtctcaagcataaggcacggggcacgcttgtcatctgctcctaaagtgtccggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgagttgtctcaagcataaggcacggggcacgcttgtcatctgctcctaaagtgtccggc 320
Query: 121 tttgaaattcccacattgaaaaagtaattaatgggttgattgattagtcagttgctggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgaaattcccacattgaaaaagtaattaatgggttgattgattagtcagttgctggga 380
Query: 181 aggttcacagaatcccagcgttgtctcatagttctggcaacacgtgatattacagaccca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggttcacagaatcccagcgttgtctcatagttctggcaacacgtgatattacagaccca 440
Query: 241 tggtttcttccctgctgtgactccagggataatcattcctagtcttttccagcttcctag 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtttcttccctgctgtaactccagggataatcattcctagtcttttccagcttcctag 500
Query: 301 tggcccctggagctcctgggctttgacaccatggctcccatctctgcctccaccttcaca 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 tggcccctggagctcctgggctttgacaccatggctcccatctctgtctccaccttcaca 560
Query: 361 tgatgtcccccctgcacattctagtaaaaacagtcgacgtggatgcagggcccatcttag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgatgtcccccctgcacattctagtaaaaacagtcgacgtggatgcagggcccatcttag 620
Query: 421 ctcagtatgaccaaatcccatctgcaatgacacatttcaaaacaagaatgatcacattct 480
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 621 ctcagtatgaccaaatcccatctgcaatgacacatttcaaaacgagaatgatcacattct 680
Query: 481 aaatggtggatgaatgtgactttgggtggtcagggaactaatccattacactaagtaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatggtggatgaatgtgactttgggtggtcagggaactaatccattacactaagtaaat 740
Query: 541 aaaacatccagcttagagaccagtagatcagggtgaatctgttacctaagaggttccttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaacatccagcttagagaccagtagatcagggtgaatctgttacctaagaggttccttt 800
Query: 601 agaagaaggagtttggatgtcttgaatggtgacacctagtgagtaactgtgatattgcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaagaaggagtttggatgtcttgaatggtgacacctagtgagtaactgtgatattgcaa 860
Query: 661 ctttgctcaagtagtgattgcaagtgcatgacaaat 696
||||||||||||||||||||||||||||||||||||
Sbjct: 861 ctttgctcaagtagtgattgcaagtgcatgacaaat 896
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1096
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1086
Effective search space: 744996
Effective search space used: 744996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
