Query= MSMg01no323_p16.b1 MSMg01no323_p16.b1 CHROMAT_FILE:
MSMg01no323_p16.b1 PHD_FILE: MSMg01no323_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:09 2005
(679 letters)
>mm_chr7_50683093_50684172
Length = 1080
Score = 1170 bits (605), Expect = 0.0
Identities = 657/690 (95%), Gaps = 26/690 (3%)
Strand = Plus / Plus
Query: 1 tttaatcccaacactcgagaggcagaggcaggcggatttctgagttcgaggccagcctgg 60
|||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 206 tttaatcccagcactcgggaggcagaggcaggcagatttctgagttcgaggccagcctgg 265
Query: 61 tctacaaagtgagctccaggacagcc----------agagaaaccctgtctcaaaaaaac 110
|||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 266 tctacaaagtgagctccaggacagccggggctatacagagaaaccctgtctcgaaaaaac 325
Query: 111 aaaaacaaaaaaaacaaaacaaaagatacttccagatatgggggcagaaggaacagagcc 170
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaa---------------caaaagatacttccagatatgggggcagaaggaacagagcc 370
Query: 171 aggttacatgagacctcgtctcaaataaataaaataattaattactaagttaagccttag 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aggttacatgagacctcgtctcaaataaataaaataattaattactaagttaagccttag 430
Query: 231 acacagcagctgggaattggagctgaaatgttgggccctgagattaatcagaaaaggtaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 431 acacagcagctgggaattggagctgaaatgttgggccctgagattaatcagaaaagggaa 490
Query: 291 taagacagtggatggaggaagccacaggtactgtgtctcctggaggctgttcaaaggtac 350
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 491 taagacagtggatggaggaagtcacaggtactgtgtctcctggaggctgttcaaaggtac 550
Query: 351 cagg-cagatgtactgaccaccctgttatgttcctagggacaacctttctttgccgtcag 409
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 caggtcagatgtactgaccaccctgttatgttcctagggacaacctttctttgccgtcag 610
Query: 410 ctgggactgagtcatggcctacttcagccaccccaggcctgccaccctcgctcctgagca 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgggactgagtcatggcctacttcagccaccccaggcctgccaccctcgctcctgagca 670
Query: 470 ccctagacccaacccacctggggcttccagagcaactggcctctgtcactgtccccatcc 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ccctagacccaacccacctggggcttccagagcaactggcctctgtcactgtccccatcc 730
Query: 530 gcctagacaccctgtcctacctcctacacagtgccctcctggggacctacaacctccagc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gcctagacaccctgtcctacctcctacacagtgccctcctggggacctacaacctccagc 790
Query: 590 agtctttaccgccatgctcctgcactgcccagccaagccacatctggncagacacagtca 649
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 791 agtctttaccgccatgctcctgcactgcccagccaagccacatctggccagacacagtca 850
Query: 650 ggaggccacccaggagatcgggccaggccc 679
||||||||||||||||||||||||||||||
Sbjct: 851 ggaggccacccaggagatcgggccaggccc 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 679
Length of database: 1080
Length adjustment: 10
Effective length of query: 669
Effective length of database: 1070
Effective search space: 715830
Effective search space used: 715830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_p16.g1 MSMg01no323_p16.g1 CHROMAT_FILE:
MSMg01no323_p16.g1 PHD_FILE: MSMg01no323_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:09 2005
(644 letters)
>mm_chr7_50827786_50828829
Length = 1044
Score = 714 bits (369), Expect = 0.0
Identities = 375/377 (99%)
Strand = Plus / Minus
Query: 265 cacacgtaatgtctctcccctgtatgtatccgataatgtaccttcagctgggatgtatta 324
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 cacacgtaaggtctctcccctgtatgtatccgataatgtaccttcagctgggatgtatta 985
Query: 325 ttgaatgatttgccacagtcccgacactcataaggtttctctccagtgtgaattcgatgg 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984 ttgaatgatttgccacagtcccgacactcataaggtttctctccagtgtgaattcgatgg 925
Query: 385 tggacctgcaggttggacgttcgactaaatgacttcccgcagtcgggacactcataaggt 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924 tggacctgcaggttggacgttcgactaaatgacttcccgcagtcgggacactcataaggt 865
Query: 445 ttctctgggtgagtttcttgatgggaggcaaactctgtcttctggaggaaggcttcccca 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 ttctctgggtgagtttcttgatgggaggcaaactctgtcttctggaggaaggcttcccca 805
Query: 505 cacttgtgacagacaaaaggtccttccccagcgtgagctgcctggtgtttacagaaagca 564
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 804 cacttgtgacagacaaaaggtccttctccagcgtgagctgcctggtgtttacagaaagca 745
Query: 565 gattcgtcatagaagacttttctacattccgtgccttcatctagtttctcacgagaatga 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gattcgtcatagaagacttttctacattccgtgccttcatctagtttctcacgagaatga 685
Query: 625 gcttctttctctgtcag 641
|||||||||||||||||
Sbjct: 684 gcttctttctctgtcag 668
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
