Query= MSMg01no325_p05.b1 MSMg01no325_p05.b1 CHROMAT_FILE:
MSMg01no325_p05.b1 PHD_FILE: MSMg01no325_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:33 2005
(689 letters)
>mm_chr7_104509143_104510231
Length = 1089
Score = 1230 bits (636), Expect = 0.0
Identities = 670/684 (97%), Gaps = 6/684 (0%)
Strand = Plus / Minus
Query: 5 gaattcctatcaagtgtaagtgttgcattagagggtctgcacagctggaaaagaaacagt 64
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 885 gaattcctatcaagtgcaagtgttgcattagagggtctgcacagttggaaaagaaacagt 826
Query: 65 accgtttgtttttcccagagatggcattagcttgctgcctgccggtactgacagtgtgag 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 825 accgtttgtttttcccagagatggcattagtttgctgcctgccggtactgacagtgtgag 766
Query: 125 tgcttgcttcacccgaccgcactgccactttggatttaacctatttgtt---taccttct 181
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 765 tgcttgcttcacccgaccacactgccactttggatttaacctatttgtttactaccttct 706
Query: 182 aactaccaaaagaacacatgaaacacctccaccataacagtcgttttttttttctgagta 241
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 705 aactaccaaaagaacacatgaaacacctccaccataacagtcg---tttttttctgagta 649
Query: 242 agaatcacagatttgcttgggttttatctttctgatagtggggctggatcttctgtccta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 agaatcacagatttgcttgggttttatctttctgatagtggggctggatcttctgtccta 589
Query: 302 tcctgtgggttgtactcagagggcttggggcaggtgactgaccacaggactcaaccagaa 361
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 588 tcctgtgggttgtactcagagggctcggggcaggtgactgaccacaggactcaaccagaa 529
Query: 362 tagcttcaggttgcctgggtaattgagacccaggctggtgccctgcctcataatggaaat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tagcttcaggttgcctgggtaattgagacccaggctggtgccctgcctcataatggaaat 469
Query: 422 gcaaacaagccaagttctataatggagcacagagcccttgccgggaaaccacaaattgct 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gcaaacaagccaagttctataatggagcacagagcccttgccgggaaaccacaaattgct 409
Query: 482 gacttgctcctgcaaagattattcagaagccaagtccagaaattctaaagacgcataaaa 541
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 408 gacttgctcctgcaaagattattcagaagccaagtccagaaattctaaagacacataaaa 349
Query: 542 cctgggttggaggaggacttgcatttagaagagaagccagtagcaatggctttggtggtg 601
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gctgggttggaggaggacttgcatttagaagagaagccagtagcaatggctttggtggtg 289
Query: 602 cttcctagagagacagtgagaagccatggcccttcgccactcctgatggtcccagggcac 661
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 288 cttcctagagagacagtgagaagccatggcccttcgccactcctgatggtcccaggacac 229
Query: 662 tcagggtccctccaggaaggatcc 685
||||||||||||||||||||||||
Sbjct: 228 tcagggtccctccaggaaggatcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_p05.g1 MSMg01no325_p05.g1 CHROMAT_FILE:
MSMg01no325_p05.g1 PHD_FILE: MSMg01no325_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:33 2005
(658 letters)
>mm_chr7_104324415_104325472
Length = 1058
Score = 1257 bits (650), Expect = 0.0
Identities = 655/658 (99%), Gaps = 3/658 (0%)
Strand = Plus / Plus
Query: 1 ctcttatagatctgatctctatatattgtttccttctttaaggaaatccatataaatatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttatagatctgatctctatatattgtttccttctttaaggaaatccatataaatatt 260
Query: 61 taaataaatcctcctagaagaggggtggtagtatgcttcttaaataccagcactagagta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaataaatcctcctagaagaggggtggtagtatgcttcttaaataccagcactagagta 320
Query: 121 gaaaggtcaggagttcaagattatcctacatatcaaatctgtcattatgggattacttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaaggtcaggagttcaagattatcctacatatcaaatctgtcattatgggattacttta 380
Query: 181 gcttctcatttgaatgatatttacttctggaatcaagttgtgatacaattctaaatgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttctcatttgaatgatatttacttctggaatcaagttgtgatacaattctaaatgaga 440
Query: 241 cgcttatgtgacaatgaggctataacactcgtcttccataaaaagtaataaataagttat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgcttatgtgacaatgaggctataacactcgtcttccataaaaagtaataaataagttat 500
Query: 301 ttcaatactgatacggaataacctccatgacttatttaaatgaaaaaagtaagatgcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttcaatactgatacggaataacctccatgacttatttaaatgaaaaaagtaagatgcatg 560
Query: 361 taacatacaatgggaaacatgatatatgcttactatcatatgcataaaatatctcaaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taacatacaatgggaaacatgatatatgcttactatcatatgcataaaatatctcaaaat 620
Query: 421 gaaacacaggaaactggtggcagtgattatctctacaaaacagaaaagaattctggggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaacacaggaaactggtggcagtgattatctctacaaaacagaaaagaattctggggtt 680
Query: 481 aaagtcagggaaacttgttaatattttctattctatacaactcattgttgttgttattgt 540
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 681 aaagtcagggaaacttgttaatattttctattctatacaactc---gttgttgttattgt 737
Query: 541 tattgttgttgtttttgagacaagttctgactatgtaacctaggctagccttgaatccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tattgttgttgtttttgagacaagttctgactatgtaacctaggctagccttgaatccaa 797
Query: 601 aattctggtcttatcctccatggttctgggattacaaaactgcacccacatgctgttg 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 aattctggtcttatcctccatggttctgggattacaaaactgcacccacatgctgttg 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
