Query= MSMg01no328_p14.b1 MSMg01no328_p14.b1 CHROMAT_FILE:
MSMg01no328_p14.b1 PHD_FILE: MSMg01no328_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:16 2005
(555 letters)
>mm_chr7_51064561_51065515
Length = 955
Score = 1004 bits (519), Expect = 0.0
Identities = 543/551 (98%)
Strand = Plus / Minus
Query: 5 gaattctctgccctccccctcttccttctccctcctcttccagagacaggctgtcactct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaattctctgccctccccctcttccttctccctcctcttccagagacaggctgtcactct 659
Query: 65 atagcccatgcttgccttgaacttgtgatcctcccatctgacttttgaatgtgggggtgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 atagcccatgcttgccttgaacttgtgatcctcccatctgacttttgaatgtgggggtgt 599
Query: 125 cagatctgtgttggcatttctctatggagccctatatcaaaccacagaggttaaaaatcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cagatctgtgttggcatttctctatggagccctatatcaaaccacagaggttaaaaatcc 539
Query: 185 aagtttttctctggtccttgctttcttcacagtcctcatgccatatcctgtttcagaccc 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 aagtctttctctggtccttgctttcttcacagtcctcatgccatatcctgtttcagaccc 479
Query: 245 aatgccccaaacacatgaaagagctgtattgagtatcaactgtataccaggctggcccac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatgccccaaacacatgaaagagctgtattgagtatcaactgtataccaggctggcccac 419
Query: 305 atgtcaaagatacagagatgcacacgcttgaatagagactcttttatttcaaggtgttgg 364
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 418 atgtcaaagatacagagatgcatacgcttgaatagagactcttttatttcaaggtgttgg 359
Query: 365 tagactttcacacccacaataatcaactcatgataaggctagggaaatgcctagttggta 424
|||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 358 tagactttcataaaaacaataatcaactcatgataaggctagggaaatggctagttggta 299
Query: 425 cttgctctgcaagcttgaggacctgagttcaaatcctcagcccccacataaaaagccaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cttgctctgcaagcttgaggacctgagttcaaatcctcagcccccacataaaaagccaaa 239
Query: 485 catgctgtgcatacctacaaccccacgtcggtatgcctgcaaccctgttattgccgctgg 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 238 catgctgtgcatacctacaaccccacgtcggtatgcctgcaaccctgttattgccggtgg 179
Query: 545 atggagacagg 555
|||||||||||
Sbjct: 178 atggagacagg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space: 515025
Effective search space used: 515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no328_p14.g1 MSMg01no328_p14.g1 CHROMAT_FILE:
MSMg01no328_p14.g1 PHD_FILE: MSMg01no328_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:16 2005
(280 letters)
>mm_chr7_50885732_50886417
Length = 686
Score = 447 bits (231), Expect = e-130
Identities = 268/281 (95%), Gaps = 6/281 (2%)
Strand = Plus / Plus
Query: 2 aagaaacctggaccaacaagcacagctcttctctcaccattggc-catcttgcgttaaga 60
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 202 aagaaacctggaccaacaagcacagctcttctctcaccattggcacgtcttgcgttaaga 261
Query: 61 ggtgtgaaacaaagagatgaa-tctggatgggtgatagttgtgctaaaggaatgccccca 119
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggtgtgaaacaaagagatgaagtctggatgggtgatagttgtgctaaaggaatgccccca 321
Query: 120 gattggagcccctgtgacgttccattcttaggac-caaggtccttcccatggcttttctc 178
|||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 322 gattggagcccctgtgacgttccattcttaggacacaaggtccttcccatggcagctctc 381
Query: 179 acatttatgcctggcaccacagggcccagtctagtccttcacatgaagccttttctgttt 238
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 382 acatttatgcctggcaccacagggcccagtctagtccttcacatgaagccgtttctgttt 441
Query: 239 atcttttt-cagatgcca--gaggggaggctggtccaaagc 276
| ||||| ||||||||| |||||||||||||||||||||
Sbjct: 442 accttttcacagatgccacagaggggaggctggtccaaagc 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 686
Length adjustment: 9
Effective length of query: 271
Effective length of database: 677
Effective search space: 183467
Effective search space used: 183467
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
