Query= MSMg01no329_e23.b1 MSMg01no329_e23.b1 CHROMAT_FILE:
MSMg01no329_e23.b1 PHD_FILE: MSMg01no329_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:43 2005
(647 letters)
>mm_chr7_109403960_109405006
Length = 1047
Score = 638 bits (330), Expect = 0.0
Identities = 345/352 (98%), Gaps = 4/352 (1%)
Strand = Plus / Minus
Query: 300 cctgtgtc----aacaaacaaacaaacatcatagaattacaccaagatcagttatatatg 355
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1047 cctgtgtcaacaaacaaacaaacaaacatcatagaattacaccaagatcagttatatacg 988
Query: 356 ttaagtgttacaatgcacaccaacatcccaggcactcagaaggtagaggcagaagaataa 415
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 987 ttaggtgttacaatgcacaccaacattccaggcactcagaaggtagaggcagaagaataa 928
Query: 416 ggagttcaagatcaaccttagctccagaataaataggaggctaaccttgggaaacatgaa 475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 927 ggagttcaagatcaaccttagctccagaataaataggaggctaaccttgggaaacatgaa 868
Query: 476 actcagcctcaaaaacaaaacaacaaaatgaactaaagttataggcatcaaaacattctg 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 actcagcctcaaaaacaaaacaacaaaatgaactaaagttataggcatcaaaacattctg 808
Query: 536 atgataacgctgagaatagatcaaaaaggtaggagctagacaggtgaggtagtcaaagag 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 atgataacgctgagaatagatcaaaaaggtaggagctagacaggtgaggtagtcaaagag 748
Query: 596 acatacacggaaaacccagctcaccttgttaatttaatttaattattgtttg 647
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 acatacacggaaaacccagctcaccttgttaatttaatttaattattgtttg 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_e23.g1 MSMg01no329_e23.g1 CHROMAT_FILE:
MSMg01no329_e23.g1 PHD_FILE: MSMg01no329_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:43 2005
(548 letters)
>mm_chr7_109250491_109251438
Length = 948
Score = 1002 bits (518), Expect = 0.0
Identities = 539/546 (98%)
Strand = Plus / Plus
Query: 1 ccagtgtcccagaccaatctctgctgcatttcccccgtgacacaggtcaccaaggaaagc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 ccagtgtcccagaccaatctctgctgcatttcccccgtgacactggtcaccaaggaaagc 260
Query: 61 aatctatttactctgaggtgctgtctgattggcaatgctcacaccgcctcttagcctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatctatttactctgaggtgctgtctgattggcaatgctcacaccgcctcttagcctgtt 320
Query: 121 taccagagactggggagaggggagtcttccatcacagactgagcaaaaggaggccagaag 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taccagagactggggggaggggagtcttccatcacagactgagcaaaaggaggccagaag 380
Query: 181 tgactgtagaaatgagggtatgtggtggacacaggcaggctttagcgaggcttccgttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgactgtagaaatgagggtatgtggtggacacaggcaggctttagcgaggcttccgttct 440
Query: 241 ctaatggacgggagccagcgctgacagatagggtgcgctgtctggacaagagaagaggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctaatggacgggagccagcgctgacagatagggtgcgctgtctggacaagagaagaggtg 500
Query: 301 ggcttccacggattttccgggattactgactggggtcatcatcttgccccaacgacatgg 360
|||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 501 ggcttccacggattttccgggattactgactggggtcatcatcttgcctgaaggacatgg 560
Query: 361 agggctcagcagctgaagctgtgagacctgagcttcactgctcgcaatgctcaggctgct 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 561 agggctcagcagctgaagctgtgagacctgagcttcactgctcccaatgctcaggctgct 620
Query: 421 ataaaacctctggcagtggagggcagaaaaatcaccctgcccaaagaggtgattgacata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataaaacctctggcagtggagggcagaaaaatcaccctgcccaaagaggtgattgacata 680
Query: 481 tctgccttcagagtgacagaacctgactcaaaagggaacacatggatgccagtctctcca 540
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 681 tctgccttcagagtgacagaacctgactcaaaagggaacacatggacgccagtctctcca 740
Query: 541 tcccag 546
||||||
Sbjct: 741 tcccag 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space: 504644
Effective search space used: 504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
