Query= MSMg01no330_e09.b1 MSMg01no330_e09.b1 CHROMAT_FILE:
MSMg01no330_e09.b1 PHD_FILE: MSMg01no330_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:57 2005
(295 letters)
>mm_chr7_129333444_129334138
Length = 695
Score = 501 bits (259), Expect = e-146
Identities = 282/291 (96%), Gaps = 3/291 (1%)
Strand = Plus / Minus
Query: 1 tggcctcgaactcagaaatccggctgcctctgcctcccgagtgctgttattaccggcatg 60
|||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 566 tggcctcgaactcagaaatccggctgcctctgcctcccgagtgctgggattaaaggcatg 507
Query: 61 cgccaccaccgcccagctgctaaggcttatttatcatagccctgaatgagtcttgctggc 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cg---ccaccgcccagctgctaaggcttatttatcatagccctgaatgagtcttgctggc 450
Query: 121 tggtatctggccccgactcctcctaggtgggctatgggctcatgggagtccacttcttgg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tggtatctggccccaactcctcctaggtgggctatgggctcatgggagtccacttcttgg 390
Query: 181 gagaattagttgcctcgggtcagttgggacatgttgcttagtcctgcgtgggactgaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gagaattagttgcctcgggtcagttgggacatgttgcttagtcctgcgtgggactgaata 330
Query: 241 gatagcataagagcacagaaggcatatccctagtcacaacgtttgtgcttc 291
|||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 329 gatagcataagagcgcagaaggcatatccctagtcacaacgtttgtgcttc 279
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_e09.g1 MSMg01no330_e09.g1 CHROMAT_FILE:
MSMg01no330_e09.g1 PHD_FILE: MSMg01no330_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:57 2005
(285 letters)
>mm_chr7_129178505_129179190
Length = 686
Score = 484 bits (250), Expect = e-141
Identities = 277/286 (96%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 aatgcctggtacctccactgagggttagaactaactcctaaaagttgacccctgacctca 60
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 aatgcctggaacctccactgagggttagaactgactcctaaaagttgacccctgacctca 260
Query: 61 cgtgtacacctgcacactacacagataattaaaaaatcaa-tgactttatatggagctga 119
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 cgtgtacacttgcacactacacagataattaaaaaatcaaatgactttatatggagctga 320
Query: 120 ggatggaggatgacctggaactgctaatcctccgctggcattacaggcccaagacaccac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatggaggatgacctggaactgctaatcctccgctggcattacaggcccaagacaccgt 380
Query: 180 agcaggtccaccagcacttctatcaccgtgggaacggtcacatccctggagcatgagcct 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 agcaggtccaccagcacttctatcaccgtggtaacggtcacatccctggagcatgagcct 440
Query: 240 atgtttctatcgcctctatctccctatcctctccctcctttttggc 285
||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 441 atgtttctatcacctctatctccctatcctctccctccattttggc 486
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 686
Length adjustment: 9
Effective length of query: 276
Effective length of database: 677
Effective search space: 186852
Effective search space used: 186852
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
