Query= MSMg01no336_i24.b1 MSMg01no336_i24.b1 CHROMAT_FILE:
MSMg01no336_i24.b1 PHD_FILE: MSMg01no336_i24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:39 2005
(218 letters)
>mm_chr7_107905302_107905913
Length = 612
Score = 381 bits (197), Expect = e-110
Identities = 207/213 (97%), Gaps = 6/213 (2%)
Strand = Plus / Plus
Query: 4 ggaattcactcatttactcgtatgaacatttgatgagaacctgtcagtcaggttagaagt 63
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactcatttact-gtatgaacatttgatgagaacctgtcagtcaggttagaagt 262
Query: 64 gctgttgaccaagacagttctagctctcacattttagtggaggtgactgacagtaatcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gctgttgaccaagacagttctagctctcacattttagtggaggtgactgacagtaatcaa 322
Query: 124 actaaataaaacaaaatgatatgttaataccataatagaaaaggcaagattgaggaaata 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 actaaataaaacaaaatgatatgttaataccataatagaaaaggcaagattgaggaaata 382
Query: 184 gtagtttttttttggggggggggggatgatcaa 216
|||||||||| ||||||||||||||||||
Sbjct: 383 gtagtttttt-----ggggggggggatgatcaa 410
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 612
Length adjustment: 9
Effective length of query: 209
Effective length of database: 603
Effective search space: 126027
Effective search space used: 126027
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no336_i24.g1 MSMg01no336_i24.g1 CHROMAT_FILE:
MSMg01no336_i24.g1 PHD_FILE: MSMg01no336_i24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:39 2005
(466 letters)
>mm_chr7_108087239_108088104
Length = 866
Score = 803 bits (415), Expect = 0.0
Identities = 421/423 (99%)
Strand = Plus / Minus
Query: 43 aacttcatgaggagaagctgagaggaaataaataggacagaaaaaaatcgacttgggcca 102
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 aacttcatgaggagaagctgagaggaaataaataggacagaaaaaaatcgacttgggcca 807
Query: 103 gggtggtgccacaggcctttcatcccagcacttgggaggcagagtcaggggagctctgtg 162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gggtggtgccacaggcctttcatcccagcacttgggaggcagagtcaggggagctctgtg 747
Query: 163 atttccaggccagcctgatctacagagtgagcttcagggcagccaaggctacacagagaa 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 atttccaggccagcctgatctacagagtgagcttcagggcagccaaggctacacagagaa 687
Query: 223 accctgtgtctaaaaaataaacaaaggcgaatttctctcaagctttagctttactggagt 282
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 686 accctgtgtctaaaaaataaacaaaagcgaatttctctcaagctttagctttactggagt 627
Query: 283 acacaggtccatgatatgacatcagtatggatctttatggggtgatgaggctaagagatg 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 acacaggtccatgatatgacatcagtatggatctttatggggtgatgaggctaagagatg 567
Query: 343 acataattaaagacataattgttcagacagtgagatgaaggcacggggcgaaagaacggg 402
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 566 acataattaaagacataattgttcagacagtgagatgaaggcgcggggcgaaagaacggg 507
Query: 403 gttgccagtgagcatgctactgaaagggtgtgtattgcttccccagactctccgagcata 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gttgccagtgagcatgctactgaaagggtgtgtattgcttccccagactctccgagcata 447
Query: 463 gga 465
|||
Sbjct: 446 gga 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
