Query= MSMg01no336_p14.b1 MSMg01no336_p14.b1 CHROMAT_FILE:
MSMg01no336_p14.b1 PHD_FILE: MSMg01no336_p14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:12 2005
(514 letters)
>mm_chr7_24549700_24550613
Length = 914
Score = 669 bits (346), Expect = 0.0
Identities = 388/402 (96%), Gaps = 1/402 (0%)
Strand = Plus / Minus
Query: 5 gaattcacatgttcacaacattgcataagtgcacatgagtatgcccacatattcagtgta 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaattcacatgcacacaacattgcataagtgcacatgagtatgcccacatattcagtgta 342
Query: 65 attaaaaattatgagattttattatgaaaaacatgtgtctttgtgtgacaaaattctgta 124
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 attaaaaattatgaaattttattatgaaaaacatgtgtctttgtgtgacaaaattctgtg 282
Query: 125 accatgataaatagtatatgaaagatgctaattggccttaagatttcagcagatctgcgt 184
|||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||
Sbjct: 281 accatgataaatagtatatgaaagctgctaattggccttaagatttcagaagatttgcgt 222
Query: 185 ccatgatggtggagtgaaaacatggtgacagagtgagtttagagcacacatctttatccc 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 221 ccatgatggtggagtgaaaacatggtgacagagtgagtttagagctcacatctttatccc 162
Query: 245 caagcagaaacaggagaactagagatagtggaaggcatttaaattttaaccctcggttta 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 161 caagcagaaacaggagaactagagatagtggaaggcatttaa-ttttaacccttggttta 103
Query: 305 aagttgcatttccagcaacaaggccataattctttcttttcttctttcattttacatccc 364
||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 102 aagatgcatttccagcaacaaggccataattcttccttttcttctatcattttacatccc 43
Query: 365 aataactgccatcctcctggtcaacccctcccacaattttcc 406
||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 42 aataactgccatcttcctggtcaacccctcccacaattttcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_p14.g1 MSMg01no336_p14.g1 CHROMAT_FILE:
MSMg01no336_p14.g1 PHD_FILE: MSMg01no336_p14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:12 2005
(451 letters)
>mm_chr7_24390663_24391513
Length = 851
Score = 180 bits (93), Expect = 2e-49
Identities = 99/101 (98%)
Strand = Plus / Plus
Query: 1 caatcaagtaaaaatacatgcttgtctataaatgttaatttataaatatgaagatcccat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatcaagcaaaaatacatgcttgtctataaatgttaatttataaatatgaagatcccat 260
Query: 61 actgggttaaaatgtgggtcatattattgaccaatagagat 101
|||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 actgggttaaaatgtgggtcatgttattgaccaatagagat 301
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
