XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
CTTCATGTTAGTACCAGAACTTCGGTATTAGCAAATAATGTACAATCACT
CTGAAAACCTCCATCCACTCTCGAAGGTTAATATAACCCTGGTTACCCTC
AATAGAGGAGAGTTGCTTCACTGAAAACCTCGTGGAGAAGACACTCAAGC
CAGCTGAGATGGTGCAAATCATCCTGCCCTTCATTCCTTCCAGCCCTGCC
CCAGTATGCAATGGTTCCTGGATACCCGGAGGGCATAAGCAGAACTGGGT
TGGCAGCTGATATCCACATAGATTCAACAGTACCTCTGGTTCGAGCAAGG
AAGGTTGAGTGTTCCCAAGTATTTGGCATCAGCCCCAAGGGCGTTAAGCC
TCACATACTGAGGGCTGAGAGCCTATCTTTTCCTCCTTTGTTTTCAGTTT
ATGTCATCATTTCAGTTTCAGATATCGGAAGAATAATTAAAGCCTTCTGG
CTTGGGCACTCTCTGTTGTTGGCAGAAGATCCCTAATCCTCTGCCTGAAC
CCTAACAGCTCTTTTGGTGTTGGCAAAAAAAAAACCCTATCTTCTCTCTT
CTTAAAAAATAATGAAAAATGGTTATGCAGCATCCAGGGACTACNACTTA
AGGTAGTTGCTGGAAATGTTAAAACCATAGGCAGGCTGACATCTTGGGGC
CATTGCAGAATTCCCTGCCAACCATAAGGCTGCAGGAAGCTCTTCATTGG
ATGAAGCGTT

ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAGC
ACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAA
ACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAA
TTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCC
TCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCAGTC
TGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAGGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATCTACACAATGGAGTACTACTCAGCTATTAAAAATAATGAATTTATGA
AATTCCTAGNCCAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGGA
AACATTCCCAAGAAACTCCACCAAATGGATTCCCTGATAATGGAAATAAC
CCCCACCCAGGAAACCCCGAAATAAAATAAATCTGGTTAACCCTGAACCC
CAAAAAAGAAAAAGGAGGGGGACCATGCCCCTCCCCTATTTGGAAAAAAC
CCCTGGGGGGGGGGGGA

Query= MSMg01no337_h21.b1 MSMg01no337_h21.b1 CHROMAT_FILE:
MSMg01no337_h21.b1 PHD_FILE: MSMg01no337_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:53 2005
         (600 letters)



>mm_chr7_94379568_94380568
          Length = 1001

 Score = 1021 bits (528), Expect = 0.0
 Identities = 540/544 (99%), Gaps = 1/544 (0%)
 Strand = Plus / Minus

                                                                        
Query: 58   tcactctgaaaacctccatccactctcgaaggttaatataaccctggttaccctcaatag 117
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 tcactctgaaaacctccatccactctcgaaggttaatataaccctggttaccctcaatag 942

                                                                        
Query: 118  aggagagttgcttcactgaaaacctcgtggagaagacactcaagccagctgagatggtgc 177
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941  aggagatttgcttcactgaaaacctcgtggagaagacactcaagccagctgagatggtgc 882

                                                                        
Query: 178  aaatcatcctgcccttcattccttccagccctgccccagtatgcaatggttcctggatac 237
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881  aaatcatcctgcccttcattccttccagccctgccccagtatgcaatggttcctggatac 822

                                                                        
Query: 238  ccggagggcataagcagaactgggttggcagctgatatccacatagattcaacagtacct 297
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 821  ccggagggcataagcagaactgggttggcagctgatatccacatagattcaacggtacct 762

                                                                        
Query: 298  ctggttcgagcaaggaaggttgagtgttcccaagtatttggcatcagccccaagggcgtt 357
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 761  ctggttcgagcaaggaaggttgagtgttcccaagtatttagcatcagccccaagggcgtt 702

                                                                        
Query: 358  aagcctcacatactgagggctgagagcctatcttttcctcctttgttttcagtttatgtc 417
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701  aagcctcacatactgagggctgagagcctatcttttcctcctttgttttcagtttatgtc 642

                                                                        
Query: 418  atcatttcagtttcagatatcggaagaataattaaagccttctggcttgggcactctctg 477
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641  atcatttcagtttcagatatcggaagaataattaaagccttctggcttgggcactctctg 582

                                                                        
Query: 478  ttgttggcagaagatccctaatcctctgcctgaaccctaacagctcttttggtgttggc- 536
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 581  ttgttggcagaagatccctaatcctctgcctgaaccctaacagctcttttggtgttggca 522

                                                                        
Query: 537  aaaaaaaaaaccctatcttctctcttcttaaaaaataatgaaaaatggttatgcagcatc 596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521  aaaaaaaaaaccctatcttctctcttcttaaaaaataatgaaaaatggttatgcagcatc 462

                
Query: 597  cagg 600
            ||||
Sbjct: 461  cagg 458


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 600
Length of database: 1001
Length adjustment: 10
Effective length of query: 590
Effective length of database: 991
Effective search space:   584690
Effective search space used:   584690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)