Query= MSMg01no342_d19.b1 MSMg01no342_d19.b1 CHROMAT_FILE:
MSMg01no342_d19.b1 PHD_FILE: MSMg01no342_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:42 2005
(487 letters)
>mm_chr7_63820628_63821514
Length = 887
Score = 810 bits (419), Expect = 0.0
Identities = 467/483 (96%)
Strand = Plus / Plus
Query: 5 gaattctctactttccctgagtcctatgtgtggtttatctatctcctgtagtatagtctt 64
||||||||||| ||| ||||||||| |||||||||||||| ||||||||||||||| |||
Sbjct: 205 gaattctctacgttctctgagtcctgtgtgtggtttatctgtctcctgtagtataggctt 264
Query: 65 gaataacaacatatttgaacataacatatgatcctaattttaatacactagatcttataa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaataacaacatatttgaacataacatatgatcctaattttaatacactagatcttataa 324
Query: 125 gttgtggtttcctggatgtgctttccttgggtgccagctatagttccaagttctctgttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttgtggtttcctggatgtgctttccttgggtgccagctatagttccaagttctctgttc 384
Query: 185 cctcagggtatccaggcaccattgtacaccagactggaaggatgatgcagagtccaggat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cctcagggtatccaggcaccattgtacaccagactggaaggatgatgcagagtccaggat 444
Query: 245 gggtggggtctgaagactcccggtctgtctgggagtgaaggctggaggtgtggggaagcc 304
||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||||| |
Sbjct: 445 gggtgggatctgaagactcctggtctgactgtgagtgaaggctggaggtgtggggaagac 504
Query: 305 ttcttcgagggttttcatgttctctttcagatggtactcagtgaaatagagctctttgcc 364
||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 505 ttctttgagggttttcatgttctctttcagatggtactcagtgaaatagcgctcttagcc 564
Query: 365 aatcttcagtgaaacaccttgtgtgcacacactttatttggggtgaacaaaggctatata 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 565 aatcttcagtgaaacaccttgtgtgcgcacactttatttggggtgaacaaaggctatata 624
Query: 425 tgaaccgtgcatagtgggaaggagttttcatggtgagcataaattattggctggagtttg 484
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 625 tgaaccgtgcatagtgggaaggagttttcagggtgagtataaattattggctggagtttg 684
Query: 485 aat 487
|||
Sbjct: 685 aat 687
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_d19.g1 MSMg01no342_d19.g1 CHROMAT_FILE:
MSMg01no342_d19.g1 PHD_FILE: MSMg01no342_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:42 2005
(435 letters)
>mm_chr7_63968976_63969808
Length = 833
Score = 816 bits (422), Expect = 0.0
Identities = 429/432 (99%), Gaps = 2/432 (0%)
Strand = Plus / Minus
Query: 1 caagtcttttgataggaagattgtcaagatgggtaaattagtattatgagtatgtgtgtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 caagtcttttgataggaagattgtcaagatgggtaaattagtattatgagtatgtgtgtc 538
Query: 61 acctgagtacattcgagactcaaaggtatacccctcacctggagactaacgccatttagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 acctgagtacattcgagactcaaaggtatacccctcacctggagactaacgccatttagt 478
Query: 121 gcgagaaatccaggcagctactgaagcacagatgccagcaggttatgacatttagaatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 gcgagaaatccaggcagctactgaagcacagatgccagcaggttatgacatttagaatct 418
Query: 181 ctggttttggtaggacacataatattcaaaaggagcaaagttaggtggtatagtgcagcc 240
|||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 417 ctggttttggtaggacac--aatattcaaaaggagcaaagttaggtggcatagtgcagcc 360
Query: 241 tccaaatacagtagattcagttcacaggaccattcctagggaccaagaagcctggtgttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tccaaatacagtagattcagttcacaggaccattcctagggaccaagaagcctggtgttt 300
Query: 301 tgatctgtgtcttttcctgggctcactagccatctgcctggtatcaggttcattacactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgatctgtgtcttttcctgggctcactagccatctgcctggtatcaggttcattacactg 240
Query: 361 aaccctccacattcttgaattgacactgaatatacatacgtgtgtgtgtgtgtgtgtgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aaccctccacattcttgaattgacactgaatatacatacgtgtgtgtgtgtgtgtgtgtg 180
Query: 421 tgtgtgtgtgtg 432
||||||||||||
Sbjct: 179 tgtgtgtgtgtg 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 833
Length adjustment: 9
Effective length of query: 426
Effective length of database: 824
Effective search space: 351024
Effective search space used: 351024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
