XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCAATGTG
CTTTCTACTGCAGCAGCTGCCTGCCTGCACACCTGCTCAGAGGACCACTA
TTCACCCAGGGACTGGAAGGGAAGCAGTCTGGGGGAGGCGGGCATGAAGA
CACCGTGCTCATTGTCCTAATAAGACCTCGTTGTCTTTTTACTATGAACT
GTGTTCATCGGAACACCACAGGCCACTGGCATGACACTTTGGGAGCTGCC
GGCCTTGTTTGCATATTTCCACACTTTCTCCCAGGAGCAGAGAGCAAGTT
AATTATAGGCGACAGATAGCAGCTTTTAAAATTCTCTCTTTCCTCCCTGT
TCAGTCACCCAGGGGCTTAAAAACATTTCAAGAGTGAGAATTTCTGTAGT
CCACCCACCAAGAATCTGTGCGTAAGAATAAAGTGGTTGGGTGGGGTTCT
AGCCCCAAGTCCCAGTGATCGAGTCTCACTGTGGTGTGGCTGGTTTTCTA
CTATACACAAATAATTACACAGCTAAGACTCCACACACTTTCAGAATAGA
AAAAAAGATTATTTTGACACAATATGTACCCGAACAAGAAATGGTGCCCC
ATTTGCTTAAACCCCTCAAATTTCCGGAAATATTTTTCCCCGGATGAATA
ATAATTTGGCCACCCTTTAAGTTATTCCTAAATTATTTGGGGCTAATTTT
GGTGGGGTTATATACCTCTTTTTTATTTATTTTCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXTCTTAAACTCTAATGTAGAGAGTTGGTCCGGCACTGCT
ATATATTGGCCCCCAAGATCTGGTTGCCCCCCACCCCCAGATGATATCCT
CACATATACCACCTTTTGTTGCGGAAACCTTAATCCCCAGGTTATCCCTG
ATTGGTCCATAAAGATGCCTACAGCCTGGGCTGGGTAGGAGAGAAGGGGT
GGAGTGAAGTTCCTGGACTTGGAGTCTCAGGCAGGGACCACTAGGGAGAG
AGGAAGAAGAAGGAGAAGGACAGATAGACCATGAGAGCTCATGGCCCTAA
GGAGTGGTTAGTTGGAGTAGGTGAAACATAACCAGTGATATCTCGGGGTT
AACAGGGAAGTAGACAAACAAGCACAGAAGGTCGATATCTGCCTAGCTCT
AGTGCTTTAAGGCTTATTATAAATATAAAGGTTTTGTGTCTTTTATTTGG
GAACTTTATGGTCTAAGTGAGGTAAAAATAATTATAATATTTACCACAAC
ACTCTAATGTTCCGTGGGCAAGAAATTTTGGGTATCTAAATTCCCCAGGG
GCCCTGAGGTATGGTTGTAAGGAAATAATTTCTTATTGTCCCTAGTTTCC
TTTCTCTGTTTTTCATCCACACCTTCTCTTTTCTTCTTCCCTTTTTTTTG
TTTTTTTACTCATTTCATACTTTGTTATTTCTTCCCCCGCAATTTACTTG

Query= MSMg01no342_h11.b1 MSMg01no342_h11.b1 CHROMAT_FILE:
MSMg01no342_h11.b1 PHD_FILE: MSMg01no342_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:59 2005
         (489 letters)



>mm_chr7_137856411_137857298
          Length = 888

 Score =  853 bits (441), Expect = 0.0
 Identities = 474/485 (97%), Gaps = 1/485 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccaatgtgctttctactgcagcagctgcctgcctgcacacctgctcagaggacca 64
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gaattccaatgaggtttctactgcagcagctgcctgcctgcacacctgctcagaggacca 629

                                                                       
Query: 65  ctattcacccagggactggaagggaagcagtctgggggaggcgggcatgaagacaccgtg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 ctattcacccagggactggaagggaagcagtctgggggaggcgggcatgaagacaccgtg 569

                                                                       
Query: 125 ctcattgtcctaataagacctcgttgtctttttactatgaactgtgttcatcggaacacc 184
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 568 ctcattgtcctaataagacctcgttgtctttttactatgaactgtgtgcatcggaacacc 509

                                                                       
Query: 185 acaggccactggcatgacactttgggagctgccggccttgtttgcatatttccacacttt 244
           |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 508 acaggccactagcatgacactttgggagctgctggccttgtttgcatatttccacacttt 449

                                                                       
Query: 245 ctcccaggagcagagagcaagttaattataggcgacagatagcagcttttaaaattctct 304
           |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 448 ctcccaggagcagagagcaagttaattagaggcgacagatagcagtttttaaaattctct 389

                                                                       
Query: 305 ctttcctccctgttcagtcacccaggggcttaaaaacatttcaagagtgagaatttctgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ctttcctccctgttcagtcacccaggggcttaaaaacatttcaagagtgagaatttctgt 329

                                                                       
Query: 365 agtccacccaccaagaatctgtgcgtaagaataaagtggttgggtggggttctagcccca 424
           |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 328 agtccacccaccaagaatctgtgcataagaataaagtggctgggtggggttctagcccca 269

                                                                       
Query: 425 agtcccagtgatcgagtctcactgtggtgtggctggttttctactatacacaaataatta 484
           |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct: 268 agtcccagtgatcgagtcccactgtggtgtggctggttttctact-tacacaaataatta 210

                
Query: 485 cacag 489
           |||||
Sbjct: 209 cacag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 489
Length of database: 888
Length adjustment: 10
Effective length of query: 479
Effective length of database: 878
Effective search space:   420562
Effective search space used:   420562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)