Query= MSMg01no343_f07.b1 MSMg01no343_f07.b1 CHROMAT_FILE:
MSMg01no343_f07.b1 PHD_FILE: MSMg01no343_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:07 2005
(312 letters)
>mm_chr7_77308423_77309135
Length = 713
Score = 528 bits (273), Expect = e-154
Identities = 297/305 (97%), Gaps = 1/305 (0%)
Strand = Plus / Plus
Query: 9 gaattccatgtgctttgatattggctgacacccattgccaaagtccagctctgaccctga 68
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 209 gaattccatgtgctttgatattagctgacacccattgccaaagtccagctctgaccccga 268
Query: 69 ctcaagagctctccactccctccctgcaatgtactactgggatagaaccatggttgtttc 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctcaagagctctccactccctccctgcaatgtactactgggatagaaccatggttgtttc 328
Query: 129 caatgtgcctctcacttagtttattactaaagtaatcagtcattcat-tgtcctcacaat 187
|||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 329 caatgtgcttctcacttagtttattactaaagtaatcagtcactcatgtgtcctcacaat 388
Query: 188 cagaggcaaatgtgtagcttccactgctaagcccgggtgttagtgtcttgtagcagtatc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 cagaggcaaatgtgtagcttccactgctaagcccgggtgttagtgtcttgtagcagtatc 448
Query: 248 tgcacctaaattagaaattgtcaccaaactcagaggcacaagaagaaggaagaagatgtt 307
||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||
Sbjct: 449 tgcacctaaattagaaattgtcaccaaactcagagtcacaagaagaaggaagaggaggtt 508
Query: 308 taggg 312
|||||
Sbjct: 509 taggg 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 312
Length of database: 713
Length adjustment: 9
Effective length of query: 303
Effective length of database: 704
Effective search space: 213312
Effective search space used: 213312
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_f07.g1 MSMg01no343_f07.g1 CHROMAT_FILE:
MSMg01no343_f07.g1 PHD_FILE: MSMg01no343_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:07 2005
(348 letters)
>mm_chr7_77499322_77500069
Length = 748
Score = 673 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Minus
Query: 1 tctctccccctctttccccacctttttttattttttttaaactttcttccagatgcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tctctccccctctttccccacctttttttattttttttaaactttcttccagatgcctgt 489
Query: 61 ggtctgtctgatgtagcccatgtggaaagcttgcaggaaaagtcccagtgtgctttggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtctgtctgatgtagcccatgtggaaagcttgcaggaaaagtcccagtgtgctttggaa 429
Query: 121 gagtacgttaggagccagtaccccaaccagccaacacggttcggaaagctcttgcttcgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 gagtacgttaggagccagtaccccaaccagccaacacggttcggaaagctcttgcttcgt 369
Query: 181 ctcccttccctccgcacggtctcctcctcagtcatagagcaattgtttttcgtccgtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ctcccttccctccgcacggtctcctcctcagtcatagagcaattgtttttcgtccgtttg 309
Query: 241 gtaggtaaaacccccatcgaaaccctcatccgggatatgttactgtccggcagcagtttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtaggtaaaacccccatcgaaaccctcatccgggatatgttactgtccggcagcagtttt 249
Query: 301 aactggccatatatggcaattcaataaataaatcaatcaaaataaggg 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 aactggccatatatggcaattcaataaataaatcaatcaaaataaggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
