Query= MSMg01no344_d04.b1 MSMg01no344_d04.b1 CHROMAT_FILE:
MSMg01no344_d04.b1 PHD_FILE: MSMg01no344_d04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:18 2005
(543 letters)
>mm_chr7_57562744_57563686
Length = 943
Score = 975 bits (504), Expect = 0.0
Identities = 528/536 (98%)
Strand = Plus / Plus
Query: 5 gaattctccagtaacggcttcttggtcctgaaaaccacatcatattgatccacagttaac 64
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattctccaggaagggcttcttggtcctgaaaaccacatcatattgatccacagttagc 264
Query: 65 agagaatctaaaagacaaaagattggaatttgcctctgctaacaaaaaaccgacatgatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agagaatctaaaagacaaaagattggaatttgcctctgctaacaaaaaaccgacatgatc 324
Query: 125 agccttccagaccatgctgcatttaacacttccactgggaacatgcacaggacacggtgc 184
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 agcctttcagaccatgctgcatttaacacttccactgggaacatgcataggacacggtgc 384
Query: 185 ctttgctttgctgtggggctgttggaatactttgtggtctaaagaaatgatgtttcctca 244
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 385 ctttgctttgctgtggggctgttggaatactctgtggtctaaagaaatgatgtttcctca 444
Query: 245 tacgttccataattcccattggcttcttcagctatttgatcataaaaagatgaaatctga 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tacgttccataattcccatcggcttcttcagctatttgatcataaaaagatgaaatctga 504
Query: 305 ctttaagatttttttctgggcatattttagggtttctttttttgagtcaaaatgaaacaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctttaagatttttttctgggcatattttagggtttctttttttgagtcaaaatgaaacaa 564
Query: 365 catataacatgaattcagtcccacaagccctgttatcttctgcttgtagataccattagc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catataacatgaattcagtcccacaagccctgttatcttctgcttgtagataccattagc 624
Query: 425 aatgtcttatgcttagaagtgctcatatattttttttctccaaagctctttttttctggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aatgtcttatgcttagaagtgctcatatattttttttctccaaagctctttttttctggg 684
Query: 485 tcaccagaatacctcaaggagtattgttttctcaactggtttgatagaaggctttg 540
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tcaccagaacacctcaaggagtattgttttctcaactggtttgatagaaggctttg 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_d04.g1 MSMg01no344_d04.g1 CHROMAT_FILE:
MSMg01no344_d04.g1 PHD_FILE: MSMg01no344_d04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:18 2005
(547 letters)
>mm_chr7_57718852_57719797
Length = 946
Score = 1042 bits (539), Expect = 0.0
Identities = 545/547 (99%), Gaps = 1/547 (0%)
Strand = Plus / Minus
Query: 1 attccataggtgaagcctcagggatacaaataggtcatcagtgcccttatacaagacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852 attccataggtgaagcctcagggatacaaataggtcatcagtgcccttatacaagacatc 793
Query: 61 taggaaggtccctcaccccttgcaccatgtaaagatcaagtgacaaatatgtcctttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 taggaaggtccctcaccccttgcaccatgtaaagatcaagtgacaaatatgtcctttcta 733
Query: 121 ggcatgaaatctgcagttgctttgatctagaagtttctgcctgagtgagaagacgtccct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 ggcatgaaatctgcagttgctttgatctagaagtttctgcctgagtgagaagacgtccct 673
Query: 181 ttctgttgttgacaaaccactgagttaatgaatgcactaagaaagaaccatgacttcaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ttctgttgttgacaaaccactgagttaatgaatgcactaagaaagaaccatgacttcaga 613
Query: 241 tgctcataccgatagacacatgccagtcaccaaattctactggaattcaataaaacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tgctcataccgatagacacatgccagtcaccaaattctactggaattcaataaaacatat 553
Query: 301 cgaagccttttaatctcattagcttagatccataaaccatgtaactaaaaatggaagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cgaagccttttaatctcattagcttagatccataaaccatgtaactaaaaatggaagaaa 493
Query: 361 ttaacactatggagttaaaacactggctaaaaaaaaaaatcagataacatttgagagact 420
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 492 ttaacactatggagttaaaacactggct-aaaaaaaaaatcagataacatttgagagact 434
Query: 421 ttgaagagaaaacattcaatgtcatctttatcagatttttgttttctagtattttaatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttgaagagaaaacattcaatgtcatctttatcagatttttgttttctagtattttaatct 374
Query: 481 catgtttttctgatagtaaagtgcaggtacacctgatatctgtgtctgtgggtttttttt 540
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 373 catgtttttctgatagtaaagtgcaggtacacctgatatctgtgtctgtggggttttttt 314
Query: 541 ttcaaat 547
|||||||
Sbjct: 313 ttcaaat 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
