Query= MSMg01no347_c02.b1 MSMg01no347_c02.b1 CHROMAT_FILE:
MSMg01no347_c02.b1 PHD_FILE: MSMg01no347_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:00 2005
(354 letters)
>mm_chr7_75105537_75106285
Length = 749
Score = 594 bits (307), Expect = e-174
Identities = 337/353 (95%), Gaps = 12/353 (3%)
Strand = Plus / Plus
Query: 5 gaattccaccattgcc---cttctgcccccctccccgcaatggacattggaaagcccctc 61
||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccacca----cagtcttctgcccccctccccgcaatggacattggaaagcccctc 261
Query: 62 tggagcaatggaaggtcacgtgggcctagattcctctgggctgtccatcagttctctgat 121
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 262 tggaacaatggaaggtcacgtgggcctagattcctctgggccgtccatcagttctctgat 321
Query: 122 acaaaacatgccacttaacttctctgagtttgagcaaataggcggagactcgggatgact 181
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ataaaacatgccactt-----ctctgagtttgagcaaataggcggagactcgggatgact 376
Query: 182 gtgaaagacggttctccttgtctctgtaaatggcaaaataaaattatcttctactatatt 241
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 377 gtgaaagacggttctccttgtctctgtaaacggcaaaataaaattatcttctactatatt 436
Query: 242 tagaaaaattaaactcaggaaaatttggcggaaatgtggatttttaagtttcattacttt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tagaaaaattaaactcaggaaaatttggcggaaatgtggatttttaagtttcattacttt 496
Query: 302 ttgagtgtgtgtggggggtgtccagttttggatgttggtactgtaaagttggg 354
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ttgagtgtgtgtggggggtgtccagttttggatgttggtactgtaaagttggg 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 749
Length adjustment: 9
Effective length of query: 345
Effective length of database: 740
Effective search space: 255300
Effective search space used: 255300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c02.g1 MSMg01no347_c02.g1 CHROMAT_FILE:
MSMg01no347_c02.g1 PHD_FILE: MSMg01no347_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:01 2005
(551 letters)
>mm_chr7_75276103_75277053
Length = 951
Score = 1038 bits (537), Expect = 0.0
Identities = 542/544 (99%)
Strand = Plus / Minus
Query: 1 tactgagagggaagagagacagacagacagctttcactctggcctagagtgcagagaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 tactgagagggaagagagacagacagacagctttcactctggcctagagtgcagagaaaa 685
Query: 61 ctactactttctgtgggaagaaaagtcagtcaaccacaggaatcacagaaggatccatca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctactactttctgtgggaagaaaagtcagtcaaccacaggaatcacagaaggatccatca 625
Query: 121 caagaggacgccactgtcccttaagcagagacaggactgagaagaacaaaggtactactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caagaggacgccactgtcccttaagcagagacaggactgagaagaacaaaggtactactg 565
Query: 181 ggacagaatatggagaggtcagcttgaggaagtgctctagcaaatggcatcaaggaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggacagaatatggagaggtcagcttgaggaagtgctctagcaaatggcatcaaggaggcc 505
Query: 241 atttccccaactggagagagacctcagatcctcaccacaggagccaggtagcactgtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atttccccaactggagagagacctcagatcctcaccacaggagccaggtagcactgtggt 445
Query: 301 acgcacacataccatgtgtgtgctgatgtggtgggagacacaggcagaggtggcagggtg 360
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 444 acgcacacataccatgtgtgtactgatgtggtgggagacacaggcagaggtggcagggtg 385
Query: 361 aaatcaggtcaagaagaactgagagccaggccggggccactgctctgccctgcttatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aaatcaggtcaagaagaactgagagccaggccggggccactgctctgccctgcttatgaa 325
Query: 421 agccaggggattaagtcaagacttcactcgtgattcaaaaagttatctgaagacatggng 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 324 agccaggggattaagtcaagacttcactcgtgattcaaaaagttatctgaagacatggcg 265
Query: 481 ggaagtacagctaggtctcaccacccctccccctcccccccagctctgcatgctcaactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggaagtacagctaggtctcaccacccctccccctcccccccagctctgcatgctcaactg 205
Query: 541 agga 544
||||
Sbjct: 204 agga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
