Query= MSMg01no351_h06.b1 MSMg01no351_h06.b1 CHROMAT_FILE:
MSMg01no351_h06.b1 PHD_FILE: MSMg01no351_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:42 2005
(591 letters)
>mm_chr7_117557964_117558952
Length = 989
Score = 1073 bits (555), Expect = 0.0
Identities = 579/587 (98%), Gaps = 2/587 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatagcaggctagacatctgtgttgatattttaagaaagaaacaaaaactaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 gaattcaatagcaggctagacatctgtgttgatattttaagaaagaaacaaaaactaaat 730
Query: 65 gaactaaattttagttagtgattcaaacacttagtaatgtttcctttcatgacctagaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 gaactaaattttagttagtgattcaaacacttagtaatgtttcctttcatgacctagaaa 670
Query: 125 ttagtctctttcttgccctcaagggaaaaccaaagggaacatgagtactgccaaacaact 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 ttagtctctttcttgccctcaagggaaaaccaaagggaacatgagtactgccaaacaact 610
Query: 185 gctttgtttatcgggctctttcaaagccaatataattttgtcacagcactgttttataca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctttgtttatcgggctctttcaaagccaatataattttgtcacagcactgttttataca 550
Query: 245 gggtataattacttcctacataacatctcatttcaaaaaatggatcatatttttttcaaa 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct: 549 gggtataattacttcctacataacatctcatttcaaaagatggatcatatttttt-caaa 491
Query: 305 acaagggttaccaaaaaaatcatgacttgaacctctatttaaaattttttattatgtcta 364
|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 490 acaagggttat-aaaaaaatcatgacttgaacctctctttaaaattttttattatgtcta 432
Query: 365 gaatctaactactgtgttttaacaataaattttgacttgaaaacccactgaagttctcta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gaatctaactactgtgttttaacaataaattttgacttgaaaacccactgaagttctcta 372
Query: 425 cttctctcattatgttaaacttcattctatgaggagcccactcatcaacacagaaaagta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cttctctcattatgttaaacttcattctatgaggagcccactcatcaacacagaaaagta 312
Query: 485 ccttagaaaattccaaataaacataaatgacgattttgatacacagttcctcttatgaag 544
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 311 ccttagaaaattccaaataaacataaatgacgattttgatacacaattcctcttatgaag 252
Query: 545 tagagatctccaaatacattttcctgtatgcttaagaaagaacaagt 591
||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 251 tagagatctccaaatacatttccctgtacgcttaagaaagaacaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 989
Length adjustment: 10
Effective length of query: 581
Effective length of database: 979
Effective search space: 568799
Effective search space used: 568799
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_h06.g1 MSMg01no351_h06.g1 CHROMAT_FILE:
MSMg01no351_h06.g1 PHD_FILE: MSMg01no351_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:43:42 2005
(411 letters)
>mm_chr7_117368268_117369078
Length = 811
Score = 654 bits (338), Expect = 0.0
Identities = 344/346 (99%), Gaps = 1/346 (0%)
Strand = Plus / Plus
Query: 66 acacacacacacacacacacacacacacactgctcctacttttgtagtactgaaaattga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acacacacacacacacacacacacacacactgctcctacttttgtagtactgaaaattga 325
Query: 126 gcccaggacttactacattctaagcaagctctttatcactgagctatacttccatttata 185
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcccagggcttactacattctaagcaagctctttatcactgagctatacttccatttata 385
Query: 186 atgtatatattttatttttcagacagaatctttctgtatatctctcaatgggctagaact 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgtatatattttatttttcagacagaatctttctgtatatctctcaatgggctagaact 445
Query: 246 tgctgtgtagtagattaggtaggctttaaacttacagccatcttcctgtctctccctttc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgctgtgtagtagattaggtaggctttaaacttacagccatcttcctgtctctccctttc 505
Query: 306 aggtgctcagactgtagatggaaaccatgttttgtttatctttttttttt-ctcctgaaa 364
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 506 aggtgctcagactgtagatggaaaccatgttttgtttatctttttttttttctcctgaaa 565
Query: 365 gagggtttctttgtgtagccctggctgtcctggaattcactctgta 410
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gagggtttctttgtgtagccctggctgtcctggaattcactctgta 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 89
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
