Query= MSMg01no351_n02.b1 MSMg01no351_n02.b1 CHROMAT_FILE:
MSMg01no351_n02.b1 PHD_FILE: MSMg01no351_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:09 2005
(480 letters)
>mm_chr7_38507340_38508217
Length = 878
Score = 893 bits (462), Expect = 0.0
Identities = 471/474 (99%), Gaps = 2/474 (0%)
Strand = Plus / Minus
Query: 5 gaattccatgtttgtacgcctgcctgcacagggacagctgtgggacccctgggacagact 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gaattccatgtttgtaggcctgcctgcacagggacagctgtgggacccctgggacagact 617
Query: 65 tctgggctttagacagttgcactgagttcctacagctatctgcattgagacagcatggct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tctgggctttagacagttgcactgagttcctacagctatctgcattgagacagcatggct 557
Query: 125 gttgaataatagctcctgtgggcagaacagcagtgagaagacagagggtgaccagacaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gttgaataatagctcctgtgggcagaacagcagtgagaagacagagggtgaccagacaga 497
Query: 185 agtgggtagcttcggggtgaccctgccatgcatgtcctgaggcctcatcttcatcaggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 agtgggtagcttcggggtgaccctgccatgcatgtcctgaggcctcatcttcatcaggtt 437
Query: 245 ctggtgtgcgctcttcactctggctccttccctacaggatgatttggacatcgtacctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctggtgtgcgctcttcactctggctccttccctacaggatgatttggacatcgtacctga 377
Query: 305 catcctacaatgtaggttttataattatcaaggtaatataaggtcagaagaacagagata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 catcctacaatgtaggttttataattatcaaggtaatataaggtcagaagaacagagata 317
Query: 365 aacattgtctggaggtggggaggggagtgcatatgtgttcatgtatacagtctgtgaaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aacattgtctggaggtggggaggggagtgcatatgtgttcatgtatacagtctgtgaaca 257
Query: 425 ggcacatggaggccagggttctctcattgcccctggaactctctactgatcagg 478
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 256 ggcacatggaggccaggg-tctctcattg-ccctggaactctctactgatcagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 878
Length adjustment: 10
Effective length of query: 470
Effective length of database: 868
Effective search space: 407960
Effective search space used: 407960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no351_n02.g1 MSMg01no351_n02.g1 CHROMAT_FILE:
MSMg01no351_n02.g1 PHD_FILE: MSMg01no351_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:44:09 2005
(495 letters)
>mm_chr7_38298763_38299657
Length = 895
Score = 957 bits (495), Expect = 0.0
Identities = 495/495 (100%)
Strand = Plus / Plus
Query: 1 tttcaggggtcaaggagcactgtgaggcaggtacaaacaatacttcaggtacccaatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcaggggtcaaggagcactgtgaggcaggtacaaacaatacttcaggtacccaatcct 260
Query: 61 gccgggccagcacactgctctgccacatgagaggccagtggctcctgactgtggcaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccgggccagcacactgctctgccacatgagaggccagtggctcctgactgtggcaccag 320
Query: 121 cccctcatcagcacagcccactgctgttccttaccagctggtggacaaggatattaaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cccctcatcagcacagcccactgctgttccttaccagctggtggacaaggatattaaaga 380
Query: 181 aatacgagttagagggtccttccactccattctgcctgcctccccacggtgcctctggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatacgagttagagggtccttccactccattctgcctgcctccccacggtgcctctggaa 440
Query: 241 aggcaaaacaaaacaaaacaaaacaaaaaacccacttgatcaagaatgttctggaaccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcaaaacaaaacaaaacaaaacaaaaaacccacttgatcaagaatgttctggaaccaa 500
Query: 301 gataagaatgccaggctatcgcacccctcttcccagagggggctccatttaccctccaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gataagaatgccaggctatcgcacccctcttcccagagggggctccatttaccctccaga 560
Query: 361 ataggtctgtctaaaactgtaaggagccacctctgtagaaactcacttcgggggtgaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataggtctgtctaaaactgtaaggagccacctctgtagaaactcacttcgggggtgaatc 620
Query: 421 ttgaactcaactttaaacaggagctcaggttcgtgcatatgcagacacagcctcctgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgaactcaactttaaacaggagctcaggttcgtgcatatgcagacacagcctcctgtct 680
Query: 481 gtccttgtcatggcc 495
|||||||||||||||
Sbjct: 681 gtccttgtcatggcc 695
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space: 429225
Effective search space used: 429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
