Query= MSMg01no353_b05.b1 MSMg01no353_b05.b1 CHROMAT_FILE:
MSMg01no353_b05.b1 PHD_FILE: MSMg01no353_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:50 2005
(486 letters)
>mm_chr7_119076733_119077618
Length = 886
Score = 886 bits (458), Expect = 0.0
Identities = 476/482 (98%)
Strand = Plus / Plus
Query: 5 gaattctgctcattctacttctgaaacatcttcatccacatctggtatcaaagtggtctg 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctcattctatttctgaaacatcttcatccacatctggtatcaaagtggtctg 264
Query: 65 aaatagcgttactgtgcagtccagtctaacctcatctacagactcgctgtggtcgatggc 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 aaatagcgttactgtgcagtccagtctaaccttatctacagactcgctgtggtcgatggc 324
Query: 125 gtgcagtccaatccttctccccttcgccactttctctgactctgtaggccttgcaattct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgcagtccaatccttctccccttcgccactttctctgactctgtaggccttgcaattct 384
Query: 185 tccttctaaaatagaataaaatactcctgcatcaaagctcatttttacctaacagtgtca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccttctaaaatagaataaaatactcctgcatcaaagctcatttttacctaacagtgtca 444
Query: 245 tccatatcacatgtccagcaacttgggtgagagcatgagcagatgaaaaaagataccttt 304
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tccatatcacgtgtccagcaacttgggtgagagcatgagcagatgaaaaaagataccttt 504
Query: 305 attcacttgtctgcaaggcaccttccggagctctgatgctctcagctccatcttaggagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 attcacttgtctgcaaggcaccttccggagctctgatgctctcagctccatcttaggagc 564
Query: 365 ctaagaaaactcaagcactctttatgcttcttgagctagcgggaaatggctgtctaaagt 424
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 565 ctaagaaaactcaagcactctttatgcttcttgagctagcagaaaatggctgtctaaagt 624
Query: 425 cctctctgctctgatacccatgctgctgtttcatttccctgctgtgtggtggtttatttg 484
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctctctactctgatacccatgctgctgtttcatttccctgctgtgtggtggtttatttg 684
Query: 485 ga 486
||
Sbjct: 685 ga 686
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 886
Length adjustment: 10
Effective length of query: 476
Effective length of database: 876
Effective search space: 416976
Effective search space used: 416976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_b05.g1 MSMg01no353_b05.g1 CHROMAT_FILE:
MSMg01no353_b05.g1 PHD_FILE: MSMg01no353_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:50 2005
(378 letters)
>mm_chr7_119264976_119265753
Length = 778
Score = 687 bits (355), Expect = 0.0
Identities = 373/379 (98%), Gaps = 2/379 (0%)
Strand = Plus / Minus
Query: 1 attagcaccttttcttaaaaccatctgttctatgtaggaacaactttgagtccccatcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 attagcaccttttcttaaaaccatctgttctatgtaggaacaactttgagtccccatcct 519
Query: 61 ccctgccctgggtgtggggggacactgaacacagatggccattgtgtggtggatgcggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 518 ccctgccctgggtgtggggggacactgaacacagatggccattgtgtggtggatgtggaa 459
Query: 121 ggctcacagatcct-gggggtactgagaagtagaccccccctccacgtggacggcatgga 179
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ggctcacagatcctggggggtactgagaagtagaccccccctccacgtggacggcatgga 399
Query: 180 aggatagataaaagtgctggccaggctggcttctggggtggctagggctggtggacactt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aggatagataaaagtgctggccaggctggcttctggggtggctagggctggtggacactt 339
Query: 240 cagagccggcacttcacttaagacccagattaacccggattctgcccttccagggcaatg 299
||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 cagggccggcgcttcacttaagacccagattaacccggattctgcccttccagggcaatg 279
Query: 300 cagatctacccctctttgttttactgacaaagttgtccccgtctctccgccctcccagga 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 278 cagatctacccctctttgttttactgacaaagttgtccctgtctctccgccctcc-agga 220
Query: 360 atgtatcattgatgaagac 378
|||||||||||||||||||
Sbjct: 219 atgtatcattgatgaagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
