NNNGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCAATTATGTTTCTCTGGGTCTTAGTGCTGACTGACATCCTGG
AGCAGAACACTTTCTGTTTTGTTCATATGGTTTTAATATGGTTTTAACCA
ATTGCAAGGTTATTTATAAGTTTGCAACTCCCAAGTAGACTTATAAAGCA
CCCAGATTTAAGCAGATCCAGTTGTGTGGTAGACAGAGTCCTGCTTATAT
GTGGTTTCAACTTTTTATTCCTGCACAGAGGCATGTGGCAGATTTGTTCC
TGAATATTCTCTGATTATTTGGTAACAAGTTCACAAAAGGTTCCATTGTA
AAATTACAGAAGCTCCTTTGAAAGCTAACACATGATTTAAAAACAGGGAA
TTCTATCTCACTTAAGCCACTAGTAAGACTCTGTCAGTCTGACATTCCCA
GTATGAGCAAAGGACATCAAAACAAAACTGATGGCCAGCTAGCAAATGTC
TTTGTCCAAAACGGTATCTTGGGAATTGTACAAATTTGAGTTCAGATATC
TATGCAATTTGCAGTGTATATTGCTCAACATTATTTTCGGTAACATGGGT
ACAATTTATTCTAGCTAAAGACATTCAAACTACTCCAATCTTGAAAGAAT
ATTTTCCTCAAACTAATGCATTGTACTTCCGTTTTAACAGGCCAACTGAG
AATTTTGAAGAAGCTTCCCCCCCCAACTATAATTTCCCCCCCAAATTCCA
AGTCGTCTGGTTTTTCTCN

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAGTTCTGTGTGTTGTA
CTGAGGACTACTATCGGTCCATAGTAATATGTACCATGGGTGTGAGGTTT
GTTTAGCTGCCTTATTTGCATCTGGTTGTCCAGTTTCCTGGATCCATTTA
TTGGGAAGACTTATCTTTTCACAAGCCCATGATGACTCTGTCATCAGTGA
TCAGGTTTAGAAGGGTCAAGTTTTCTTTTATATCTTGATCTATTCATAGA
TTCTTTTCTGATATCAAGTGGTCTTGTTTGCTGTCATTTAATAAGGCCTT
GACTTGTGTTAGTCCTCTGACTGAGGTCTCCTTCAATTACAGGGTGGGTA
TAGGCTCTTTTATGTCTCTCTCACTATGAACTTTATCCTTAACTTTGCTG
ATGTTCTTGTCGCCTTTGCTTGAGATTCTACCTGCTCCTGTTTCCCTTCT
ACCCACCCTATTGTTAAACTCTCCTTCCCTCCCTTTCCTTTTCCCCGTTT
TTTCCCCTTTTACTCGCTTAATCTCCCCTTCCTTTTTTTTCCTCCCTTTC
CTTCCCTTTTTTTCCCCTTTTCCCCATTCCCCTTTTTTCTCTTATTCTAT
TTCCCCTATTCTATCCCCTTTTTTCCTCCTTTTTCCCTTTCTTCCCCCCT
TTCCCCTTCCCCTTTTTCCCTTTCTTTTCCCTTTCTCTTTTCCCCCTTTC
TCTTCCTCCATTTTTCCTTTTCCCTTTTCTTTCCTCCCTTTTTTCCTN

Query= MSMg01no353_d10.b1 MSMg01no353_d10.b1 CHROMAT_FILE:
MSMg01no353_d10.b1 PHD_FILE: MSMg01no353_d10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:01 2005
         (541 letters)



>mm_chr7_122666707_122667647
          Length = 941

 Score = 1023 bits (529), Expect = 0.0
 Identities = 535/537 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaattatgtttctctgggtcttagtgctgactgacatcctggagcagaacacttt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaattatgtttctctgggtcttagtgctgactgacatcctggagcagaacacttt 264

                                                                       
Query: 65  ctgttttgttcatatggttttaatatggttttaaccaattgcaaggttatttataagttt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgttttgttcatatggttttaatatggttttaaccaattgcaaggttatttataagttt 324

                                                                       
Query: 125 gcaactcccaagtagacttataaagcacccagatttaagcagatccagttgtgtggtaga 184
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 gcaactcccaagtagacttataaagcacccaaatttaagcagatccagttgtgtggtaga 384

                                                                       
Query: 185 cagagtcctgcttatatgtggtttcaactttttattcctgcacagaggcatgtggcagat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagagtcctgcttatatgtggtttcaactttttattcctgcacagaggcatgtggcagat 444

                                                                       
Query: 245 ttgttcctgaatattctctgattatttggtaacaagttcacaaaaggttccattgtaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttgttcctgaatattctctgattatttggtaacaagttcacaaaaggttccattgtaaaa 504

                                                                       
Query: 305 ttacagaagctcctttgaaagctaacacatgatttaaaaacagggaattctatctcactt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttacagaagctcctttgaaagctaacacatgatttaaaaacagggaattctatctcactt 564

                                                                       
Query: 365 aagccactagtaagactctgtcagtctgacattcccagtatgagcaaaggacatcaaaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagccactagtaagactctgtcagtctgacattcccagtatgagcaaaggacatcaaaac 624

                                                                       
Query: 425 aaaactgatggccagctagcaaatgtctttgtccaaaacggtatcttgggaattgtacaa 484
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 625 aaaactgatggccagctagcaaatgtctttgtccaaaatggtatcttgggaattgtacaa 684

                                                                    
Query: 485 atttgagttcagatatctatgcaatttgcagtgtatattgctcaacattattttcgg 541
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atttgagttcagatatctatgcaatttgcagtgtatattgctcaacattattttcgg 741


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space:   494361
Effective search space used:   494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)