Query= MSMg01no353_f17.b1 MSMg01no353_f17.b1 CHROMAT_FILE:
MSMg01no353_f17.b1 PHD_FILE: MSMg01no353_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:12 2005
(506 letters)
>mm_chr7_95030632_95031537
Length = 906
Score = 957 bits (495), Expect = 0.0
Identities = 500/502 (99%)
Strand = Plus / Plus
Query: 5 gaattctttactgaccatggcatgcttgggaagcagagatttcatttcactattaagtag 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattgtttactgaccatggcatgcttgggaagcagagatttcatttcactattaagtag 264
Query: 65 cagttatctttgggaaaatggaggaaaatcccatgcagcaagagtaacaatgtaatgaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagttatctttgggaaaatggaggaaaatcccatgcagcaagagtaacaatgtaatgaat 324
Query: 125 gtcaacattttaaaaaacaaaataaatgtcttgtaccttttagggttatataataaaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcaacattttaaaaaacaaaataaatgtcttgtaccttttagggttatataataaaaca 384
Query: 185 tttttattgagaaagaacggggttgagaatactcatcttccccacctgtgatcacaggat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttttattgagaaagaacggggttgagaatactcatcttccccacctgtgatcacaggat 444
Query: 245 ctgggaggtttaaaataaaatcattgatattgccactttcttagctgtcaatttagcaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctgggaggtttaaaataaaatcattgatattgccactttcttagctgtcaatttagcaaa 504
Query: 305 ctgtactttcttctgtgttcttttcctgatatctcaacctacattctggctgttacacag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgtactttcttctgtgttcttttcctgatatctcaacctacattctggctgttacacag 564
Query: 365 tgttgattctgtcactaaaacttatttatttttcacactcattgtcactgatagattctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgttgattctgtcactaaaacttatttatttttcacactcattgtcactgatagattctt 624
Query: 425 aataactataaaatttgatgtcattattttttacttaccataacattctccatagaanaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 625 aataactataaaatttgatgtcattattttttacttaccataacattctccatagaaaaa 684
Query: 485 taatatacaaaatttctttttt 506
||||||||||||||||||||||
Sbjct: 685 taatatacaaaatttctttttt 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_f17.g1 MSMg01no353_f17.g1 CHROMAT_FILE:
MSMg01no353_f17.g1 PHD_FILE: MSMg01no353_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:12 2005
(439 letters)
>mm_chr7_95234324_95235160
Length = 837
Score = 803 bits (415), Expect = 0.0
Identities = 433/439 (98%), Gaps = 2/439 (0%)
Strand = Plus / Minus
Query: 1 agggcttagggttttgattctataaaatgataacatgcaaaaatacatgaaataatgtga 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 637 agggcttagggttttgattctataaaatgataatatgcaaaaatacatgaaataatgtga 578
Query: 61 agagacacatggagactgtttaataaatgatgtttctattggtaacttcaatatattcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 agagacacatggagactgtttaataaatgatgtttctattggtaacttcaatatattcat 518
Query: 121 tatgtgaattcttgcttgtttaggatgaacaagttcatgatggaaatgtttgtttgaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 tatgtgaattcttgcttgtttaggatgaacaagttcatgatggaaatgtttgtttgaagc 458
Query: 181 catggcctttctttttttaaaagtttttactaagaaaggcacatggataaatataaaaaa 240
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct: 457 catggcctttcttttttttaaagtttttactaagaaaggcacatggataaatat-aaaaa 399
Query: 241 aatggtatcattagttttcctttttttctctttcccactttaactacgcaatcaggaaat 300
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aatggcatcattagttttcc-ttttttctctttcccactttaactacgcaatcaggaaat 340
Query: 301 cacattttctggtagcttctacattctgaagtggctcattgtgactgaaaataattagag 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 339 cacattttctggtagcttctacattctgaagtggctcattgtgaccgaaaataattagag 280
Query: 361 gaggcagcaaccaagtttgtgaacagaatagatactgtgactattttcctcaatttttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 gaggcagcaaccaagtttgtgaacagaatagatactgtgactattttcctcaatttttgt 220
Query: 421 ctatttattttgacttaga 439
|||||||||||||||||||
Sbjct: 219 ctatttattttgacttaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 837
Length adjustment: 9
Effective length of query: 430
Effective length of database: 828
Effective search space: 356040
Effective search space used: 356040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
