Query= MSMg01no353_i16.b1 MSMg01no353_i16.b1 CHROMAT_FILE:
MSMg01no353_i16.b1 PHD_FILE: MSMg01no353_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:27 2005
(500 letters)
>mm_chr7_93107841_93108738
Length = 898
Score = 739 bits (382), Expect = 0.0
Identities = 479/540 (88%), Gaps = 51/540 (9%)
Strand = Plus / Minus
Query: 7 ttttcgacaatgttgtaggacatttattttttaaaaaaagatttcaaagtttcaagtaca 66
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Sbjct: 873 ttttcgacaatgttgtaggacatttatttttt-aaaaaagatttcaaagtttcaagtaca 815
Query: 67 taatatttaaa------atatatatatatatatatatatatatatatgta----c----t 112
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Sbjct: 814 taatatttaaaatggatatatatatatatatatatatatatatatatatatgctctgtgt 755
Query: 113 gtgtgtgtgtatgtgtgtgtgtgtgagagagagag------------------------- 147
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Sbjct: 754 gtgtgtgtgtgtgtgtgtgtgtgtgagagagagagagagagagagagagagagagagaga 695
Query: 148 ------g-gagaagagaaaagagaaagattatcccagttatactgccacttttagataaa 200
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Sbjct: 694 gagagagagagaagagaaaagagaaagattatcccagtgatactgccacttttagataaa 635
Query: 201 gattctattcatttttaaatagaatatatctgaattaaataaaaatggagttgatgaata 260
||||||||||| |||||| |||||||||||||||| |||||||||||||| |||||||||
Sbjct: 634 gattctattcacttttaagtagaatatatctgaataaaataaaaatggagatgatgaata 575
Query: 261 ttttttat-tttttgattagattaaacaacatatttggaagaaatgggtggagccgtggg 319
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Sbjct: 574 ---tttatatttttgattagattaaacaacatatttggaagaaatgggtggagccgtggg 518
Query: 320 ttgatataatatagacaatgagtgtttaataataaaaatcaatattcacgataaattgta 379
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Sbjct: 517 ttgatataatatagacaatgagtgtttaataataaaaatcaatattcacgataaattgta 458
Query: 380 ggatggaagagatgaaccagaaatccaaatgctcagatatagatgaggaagaatgtcgga 439
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Sbjct: 457 ggatggaagagatgaaacagaaatccaaatgcacagatatagatgaggaagaatgtcgga 398
Query: 440 aagttgtttgaacaagaacatcttaagaaacacatttgtacatctcccataagcctgtga 499
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Sbjct: 397 aagttgtttgaacaagaatatcttaagaaacacatttgtacatctcccataagcctgtga 338
Score = 58.7 bits (30), Expect = 9e-13
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 atatatatatatatatatatatatatatat 107
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Sbjct: 764 atatatatatatatatatatatatatatat 793
Score = 58.7 bits (30), Expect = 9e-13
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 atatatatatatatatatatatatatatat 107
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Sbjct: 766 atatatatatatatatatatatatatatat 795
Score = 58.7 bits (30), Expect = 9e-13
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 atatatatatatatatatatatatatatat 107
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Sbjct: 768 atatatatatatatatatatatatatatat 797
Score = 58.7 bits (30), Expect = 9e-13
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 78 atatatatatatatatatatatatatatat 107
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Sbjct: 770 atatatatatatatatatatatatatatat 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 5
Length of query: 500
Length of database: 898
Length adjustment: 10
Effective length of query: 490
Effective length of database: 888
Effective search space: 435120
Effective search space used: 435120
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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