Query= MSMg01no354_h14.b1 MSMg01no354_h14.b1 CHROMAT_FILE:
MSMg01no354_h14.b1 PHD_FILE: MSMg01no354_h14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:38 2005
(626 letters)
>mm_chr7_102751131_102752156
Length = 1026
Score = 1052 bits (544), Expect = 0.0
Identities = 600/632 (94%), Gaps = 26/632 (4%)
Strand = Plus / Plus
Query: 5 gaattcttagaatgcac--ctaaaatcatcagaattggacagatgatgtcctgcagtcta 62
|||||||||||| || ||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattcttagaa--cagaactaaaatcatcagaattggacagatgatgtccttcagtcta 262
Query: 63 tgccattttctctggatcctgccttccttttatataaattttatactacagtattactag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgccattttctctggatcctgccttccttttatataaattttatactacagtattactag 322
Query: 123 actaaaataactaatggaggttaacatacacacgtgcgcacgcgcgtgcgcacgcacaca 182
||||||||||||||||||||||||||||||| ||||||| ||| |||||
Sbjct: 323 actaaaataactaatggaggttaacatacac--gtgcgca------tgc------acaca 368
Query: 183 cacacacacacacacacacacacacacacacacacacacacacacacacacgc------- 235
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cacacacacacacacacacacacacacacacacacacacacacacacacacgcgcgcgcg 428
Query: 236 -ccctggacttctgatgtgtaggttactgcactgcactgactactctgtatgggaatgag 294
||||||||||||||||||||||||||||||||| |||||| || | |||||||||||||
Sbjct: 429 cccctggacttctgatgtgtaggttactgcactggactgaccacacggtatgggaatgag 488
Query: 295 tacaatccacccaagtcactgacaagagcacagagacctaggacttcctcagggtgccta 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tacaatccacccaagtcactgacaagagcacagagacctaggacttcctcagggtgccta 548
Query: 355 gacagtaaagtgcagtgttatcaggctaccatcctgggtagtagaacaagattgcctgtt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gacagtaaagtgcagtgttatcaggctaccatcctgggtagtagaacaagattgcctgtt 608
Query: 415 agaatctgagaccagcactttctggtctaaatccaggcagagcctgctgttcagatctgt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 agaatctgagaccagcactttctggtctaaatccaggcagagcctgctgttcagatctgt 668
Query: 475 aaccacaagtatttggaagatttggcaagaggacttccaggagatgcaggccaacctgaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aaccacaagtatttggaagatttggcaagaggacttccaggagatgcaggccaacctgaa 728
Query: 535 atatatgagttccagggctatcctgggctacagagtgatattatacttatatttcatcct 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 atatatgagttccagggctatcctgggctacagagtgatattatacttatatttcatcct 788
Query: 595 cttcttccttaccttacctcttcttccttcct 626
||||||||||||||||||||||||||||||||
Sbjct: 789 cttcttccttaccttacctcttcttccttcct 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 31
Number of successful extensions: 31
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_h14.g1 MSMg01no354_h14.g1 CHROMAT_FILE:
MSMg01no354_h14.g1 PHD_FILE: MSMg01no354_h14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:38 2005
(246 letters)
>mm_chr7_102914792_102915437
Length = 646
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%)
Strand = Plus / Minus
Query: 1 agtcactaggctaccctgccctgctgtgcagtggcactcacgattcgctgtgagaatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agtcactaggctaccctgccctgctgtgcagtggcactcacgattcgctgtgagaatcag 490
Query: 61 ctggtggcgtgtgtgtatttgtgtgttgtgtggtgtgtatgtgtactcagtatttgcatc 120
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 489 ctggtggcctgtgtgtatttgtgtgttgtgtgttgtgtatgtgtactcagtatttgcatc 430
Query: 121 tgtgatatgtattcttggtttacatctagaattatgtaaattcccagatggaagtcacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtgatatgtattcttggtttacatctagaattatgtaaattcccagatggaagtcacat 370
Query: 181 gcctttaatttgggtcttgacaggagaaggcaaaactttgatctgagccaaaccttctac 240
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 369 gcctttaatttgtgtcttgacaggggaaggcaaaactttgatctgagccaaaccttctac 310
Query: 241 cagaa 245
|||||
Sbjct: 309 cagaa 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
