Query= MSMg01no355_m01.b1 MSMg01no355_m01.b1 CHROMAT_FILE:
MSMg01no355_m01.b1 PHD_FILE: MSMg01no355_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:17 2005
(339 letters)
>mm_chr7_4613002_4613738
Length = 737
Score = 571 bits (295), Expect = e-167
Identities = 322/341 (94%), Gaps = 19/341 (5%)
Strand = Plus / Plus
Query: 1 ggactggctacacatgagccccaagggatcctctgtccctgcttcctgcgctgtgaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ggactggctacacatgagccccaagggatcctctgtccctgcttcctgcgctgtgaactc 273
Query: 61 agctccttctgcttgcactgcaagcactttgccaactgacccgtgtcccctgcctcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 agctccttctgcttgcactgcaagcactttgccaactgacccgtgtcccctgcctcaaac 333
Query: 121 acttgttcctatagcagtgtctgtagtcgtgagagactggagacaaactatacttcctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 acttgttcctatagcagtgtctgtagtcgtgagagactggagacaaactatacttcctac 393
Query: 181 aacagacaactacatcaggatttcaagtctgagaccactttaagctaacacagtgaaaat 240
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 aacag-------------gatttcaagtctgagaccactttaagctaacacagtgaaaat 440
Query: 241 gtaactaaaacattattta--agaggtagttaagtcaatgaggtcaaaaaggccatccct 298
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtaactaaaacatta---agaagaggtagttaagtcaatgaggtcaaaaaggccatccct 497
Query: 299 actctacacagtagagctgtgatggaagaaaaaaagttgtc 339
|||||||||||||||||||||||||||||||||| ||||||
Sbjct: 498 actctacacagtagagctgtgatggaagaaaaaa-gttgtc 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 737
Length adjustment: 9
Effective length of query: 330
Effective length of database: 728
Effective search space: 240240
Effective search space used: 240240
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_m01.g1 MSMg01no355_m01.g1 CHROMAT_FILE:
MSMg01no355_m01.g1 PHD_FILE: MSMg01no355_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:17 2005
(392 letters)
>mm_chr7_4783839_4784630
Length = 792
Score = 513 bits (265), Expect = e-149
Identities = 304/323 (94%), Gaps = 11/323 (3%)
Strand = Plus / Minus
Query: 70 aaatggctcagcggttaagaacactgattgctcttccagaggtcctgagttcaaatccca 129
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 792 aaatggctcagcggttaagagcactgactgctcttccagaggtcctgagttcaaatccca 733
Query: 130 gcaaccacatggtggctcacaaccatccgtaatgagacctgatgctctcttctgggttgt 189
|||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 732 gcaaccacgtgatggctcacaaccatctgtaatgagatctgatgctctcttctgggttgt 673
Query: 190 ctgaagacagctacagagtacttacatataataaatacattaaatttaaaaagaccacca 249
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 672 ctgaagacagctacagagtacttacatataataaataaattaaatttaaaaagaccacca 613
Query: 250 acacaacaacaacaacaacaacaacaacaaaaaacccatgttctggaatacgcaagctat 309
||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 612 acacaacaacaacaacaacaa----------aaacccatgttctggaatacgcaagctat 563
Query: 310 gttagaagaagagatgagaggctcagggggcctgtgcaacaactgaagaactgggtctaa 369
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 562 gttagaagaagagatgagaggctcagggggcctgtgcaacaacagaagaactgggtctaa 503
Query: 370 accggatcagggtggaggggggg 392
||||||||||||||| |||||||
Sbjct: 502 accggatcagggtgg-ggggggg 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
