Query= MSMg01no357_g07.b1 MSMg01no357_g07.b1 CHROMAT_FILE:
MSMg01no357_g07.b1 PHD_FILE: MSMg01no357_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:22 2005
(467 letters)
>mm_chr7_68858737_68859601
Length = 865
Score = 837 bits (433), Expect = 0.0
Identities = 458/467 (98%), Gaps = 2/467 (0%)
Strand = Plus / Plus
Query: 1 aggtcagggcattttctgatacatataaagctctaatgtgatttctactgacaggaatat 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 aggtcagggcattttctgatacatataaagctctaatgtgatttctactgtcaggaatat 260
Query: 61 attaacaatatattaatcaaagtaatacagtatcataaatattcagaataaatgtgaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attaacaatatattaatcaaagtaatacagtatcataaatattcagaataaatgtgaggg 320
Query: 121 acctgatctctaaagacagattaaaaaatctttttttttttatcttttgactcaaggtat 180
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 acctgatctctaaagacagattaaaaaatcttttttttt--atcttttgactcaaggtat 378
Query: 181 ccacaagtacaaggtaacaatgaaaactgtccatttcttcctttgcatgctgtaatacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ccacaagtacaaggtaacaatgaaaactgtccatttcttcctttgcatgctgtaatacca 438
Query: 241 tggtggagatgatcaggccataatttatttccctcaagggctcatgactctgctgagcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tggtggagatgatcaggccataatttatttccctcaagggctcatgactctgctgagcaa 498
Query: 301 ttaggtaacaaaagactgacatggaagaaaaaccaggctagaaaatctagtaaactacaa 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttaggtaacaaaagactgacctggaagaaaaaccaggctagaaaatctagtaaactacaa 558
Query: 361 aaaaataataataaaagaataaacaatggttgtatttttgaatgtctttgccattaatgg 420
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 559 aaaaataataataacagaataaacaatggttgtatttttgaatgtctttgacattaatgg 618
Query: 421 cagcatgtttccagcattactgtcccattatagctttgattctgggt 467
|||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 619 tagcatgtttccagcataactgtcccattacagctttgattctgggt 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 865
Length adjustment: 10
Effective length of query: 457
Effective length of database: 855
Effective search space: 390735
Effective search space used: 390735
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_g07.g1 MSMg01no357_g07.g1 CHROMAT_FILE:
MSMg01no357_g07.g1 PHD_FILE: MSMg01no357_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:22 2005
(444 letters)
>mm_chr7_68950498_68951342
Length = 845
Score = 754 bits (390), Expect = 0.0
Identities = 432/446 (96%), Gaps = 3/446 (0%)
Strand = Plus / Minus
Query: 1 aataggaggttccttgagtgagttagaataaaaagttctctagctgtgcagaaaacagtt 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 645 aataggaggttccttgagtgagttagaataaaaagttctgtagctgtgcagaaaacagtt 586
Query: 61 gattgggacttgaaaatgtggattgatttaaggatttggacagaagttgagggctactag 120
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 585 gattgggacttgaaaatgtgggttgatttaaggatttggtcagaagttgagggctactag 526
Query: 121 atattagtctttgaacttcc-ttagaaatctcagaagaagcaagggcctgatcatgttct 179
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 525 atattagtctttgaacttcctttagaaatctcagaagaagcaagggcctgatcatgttct 466
Query: 180 ctcaaggttttatcaccaattttctcatgcgtaatttgggacttatacatttaccctcct 239
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 465 ctcaaggttttatcaccaattttctcatgcataatttgggacttatacatttaccctcct 406
Query: 240 ttgctaaccatatgaaatattatgtatcttctaagggcattaaacagtacagtaagaaca 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 405 ttgctaaccatatgaaatattatgtatcttctaagggcatgaaacagtacagtaagaaca 346
Query: 300 -ggtactgtgtggctggactgtatgagcaatgacagctatgaatttgcagaggatctgtc 358
||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct: 345 gggt-ctgtgtggctggactgtatgagcaatgacagctatgactttgcagaggttctgtc 287
Query: 359 tatatatggtcctcttctctactaagggatcctatatcccttttagtgtatgcaaaaacc 418
||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 286 tatatatggtccttttctctactaagggatcccatatcccttttagtgtatgcaaaaacc 227
Query: 419 tctgctagctttgcctaaagcatcag 444
|||| |||||||||| ||||||||||
Sbjct: 226 tctggtagctttgccaaaagcatcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 845
Length adjustment: 10
Effective length of query: 434
Effective length of database: 835
Effective search space: 362390
Effective search space used: 362390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
