Query= MSMg01no359_m06.b1 MSMg01no359_m06.b1 CHROMAT_FILE:
MSMg01no359_m06.b1 PHD_FILE: MSMg01no359_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:19 2005
(425 letters)
>mm_chr7_36990202_36991026
Length = 825
Score = 681 bits (352), Expect = 0.0
Identities = 372/384 (96%), Gaps = 9/384 (2%)
Strand = Plus / Minus
Query: 5 gaattcaagagaggtcttcggagcaaagtctggagagcactcggaaccctgggaatggac 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 gaattcaagagaggtcttcagagcaaagtctggagagcactcggaaccctgggaatggac 344
Query: 65 aaacagataaagcatgctgtaagaacagatgcctgagctgagaaagcatgtggtatttgt 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aaacagataaagcatgctgtaggaacagatgcctgagctgagaaagcatgtggtatttgt 284
Query: 125 cactctaagtctggcttatcgcagcgatttcactgtgcccatttcctagcaaagggcata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 cactctaagtctggcttatcgcagcgatttcactgtgcccatttcctagcaaagggcata 224
Query: 185 gtttacgccatctttacagacaacaaacaacaacaacaacaacaacaacaacaaacatgt 244
|||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 223 gtttactccatctttacagacaaca---------aacaacaacaacaacaacaaacatgt 173
Query: 245 catgccttcccttatccattctgttgaggggtatctaggctggttccacatcttagctat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 catgccttcccttatccattctgttgaggggtatctaggctggttccacatcttagctat 113
Query: 305 tgtgaaaagtgaagccacatgtgaaaaacaagagaggataatggggagggaaaatagcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 tgtgaaaagtgaagccacatgtgaaaaacaagagaggataatggggagggaaaatagcac 53
Query: 365 acattctctctctctctctctctc 388
||||||||||||||||||||||||
Sbjct: 52 acattctctctctctctctctctc 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_m06.g1 MSMg01no359_m06.g1 CHROMAT_FILE:
MSMg01no359_m06.g1 PHD_FILE: MSMg01no359_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:20 2005
(386 letters)
>mm_chr7_36838731_36839515
Length = 785
Score = 669 bits (346), Expect = 0.0
Identities = 376/386 (97%), Gaps = 1/386 (0%)
Strand = Plus / Plus
Query: 1 taattatcagctctaactggcatccaaagcacttaggaacttcagaacgggccagcagtt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 201 taattatcagctctaactggcatctgaagcacttaggaacttcagaacgggctagcagtt 260
Query: 61 attcttggtggctgacactggctgcctgacttacaagaagatgccatcctgggagaactc 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 attcttggtggctgacactggctgcctgacttacgagaagatgccatcctgggagaactc 320
Query: 121 aagttgcaagtggtgataaaggggacaagttattctctagtttccagcctgctgctgaca 180
| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aggttgcaagtggcgataaaggggacaagttattctctagtttccag-gtgctgctgaca 379
Query: 181 cctcccagagacctttcctccttggagtcttgagcatggctgctatagactggggcagag 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctcctagagacctttcctccttggagtcttgagcatggctgctatagactggggcagag 439
Query: 241 gtatgcccatgcttgccttctcccctcatggggggcttcttaggaactgttaagacagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtatgcccatgcttgccttctcccctcatggggggcttcttaggaactgttaagacagaa 499
Query: 301 gggcactggcctgaggccatctttacaaggtgttaatagcaacctgctatggactcacat 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 500 gggcactggcctgaggccatctttacaaggtgttagtagcaacctgctatggactcacat 559
Query: 361 tcatcaaagttatgagactgatgtat 386
||||||||||||||||||||||||||
Sbjct: 560 tcatcaaagttatgagactgatgtat 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 386
Length of database: 785
Length adjustment: 9
Effective length of query: 377
Effective length of database: 776
Effective search space: 292552
Effective search space used: 292552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
