Query= MSMg01no362_h09.b1 MSMg01no362_h09.b1 CHROMAT_FILE:
MSMg01no362_h09.b1 PHD_FILE: MSMg01no362_h09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:50 2005
(536 letters)
>mm_chr7_137541647_137542584
Length = 938
Score = 638 bits (330), Expect = 0.0
Identities = 421/472 (89%), Gaps = 39/472 (8%)
Strand = Plus / Minus
Query: 5 gaattcctgtttcgaacccccc----------ccccc-aaagcatgtgaagaaaagggca 53
|||||||||||||||||||||| ||||| |||||||||||||||| |||||
Sbjct: 608 gaattcctgtttcgaacccccccccaccaccacccccaaaagcatgtgaagaaacgggca 549
Query: 54 ggtatgccaagtgttacagtgccgttttaacagtcagggtgtgatagtggcactattaaa 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggtatgccaagtgttacagtgccgttttaacagtcagggtgtgatagtggcactattaaa 489
Query: 114 c--atttttatttcagtaaattaatatattgatcatgttacttctcattataatctggtg 171
| ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 488 caaatttttatttcagtaaattaatatattgatcatgttaattctctttataatctggtg 429
Query: 172 ggcttgtgataaaatcagaaccatattatttgcaatattaaagacccataatgggttggt 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ggcttgtgataaaatcagaaccatattatttgcaatattaaagacccataatgggttggt 369
Query: 232 aaacacttgcttagcatgtctgaata---tgtcttcagtccttagcaccaccaaaacaga 288
|||||||| ||||||||||| || | || ||||||||||||||||||||||||||||
Sbjct: 368 aaacacttacttagcatgtccgag-accctggcttcagtccttagcaccaccaaaacaga 310
Query: 289 aattaaaacagaggtctcacaggcttctgggatgccaatactactgcagaggagatggct 348
|| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 309 aagtaaaacagaggtctctcaggcttctg--atgccaatactactgcagaggagatggct 252
Query: 349 ccatgagcaattgccaccaccacctc-------------------caagctgtttctaat 389
|||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 251 ccatgagccattaccaccaccacctcttaggattagtggctgttccaagctgtttctaat 192
Query: 390 aaaaggattaag-ccgtctctgacagagcagaattccgatcacgacattctt 440
|||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 191 aaaaggattaaggccgtctctgacagagcagaattccgatcatgacattctt 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 938
Length adjustment: 10
Effective length of query: 526
Effective length of database: 928
Effective search space: 488128
Effective search space used: 488128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_h09.g1 MSMg01no362_h09.g1 CHROMAT_FILE:
MSMg01no362_h09.g1 PHD_FILE: MSMg01no362_h09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:50 2005
(451 letters)
>mm_chr7_137342154_137343004
Length = 851
Score = 818 bits (423), Expect = 0.0
Identities = 444/451 (98%)
Strand = Plus / Plus
Query: 1 attttcatttggatttgggggtgggttaacaaaaagttcaatatccagagggctaatctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 attttcatttggatttgggggtgggttaacaaaaagttcaatatccagagggctaatttg 260
Query: 61 ggttctggtcctgttggatgcagactcccccactgtgagaaaaggggaggttccatcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggttctggtcctgttggatgcagactcccccactgtgagaaaaggggaggttccatcttc 320
Query: 121 tgtatgatggaacaaaacatggcagattaggtggacatctcacacatcccttgagcacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 321 tgtatgatggaacaaaacatggcagattaggtggacatctcacacatcccttgggcacca 380
Query: 181 tggcaaccagggtgggatgtcatcttggttaccagattctgggtaatttcgctcaagcta 240
||| |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 381 tgggaaccagggtgggatgtcatcttggttaccagattctggttaattttgctcaagcta 440
Query: 241 aaatcatcttgctttacatatcattgaaagaacatggcagaaagcataatactggtaaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatcatcttgctttacatatcattgaaagaacatggcagaaagcataatactggtaaca 500
Query: 301 gaaaaactggacttttatagtttttttgttttctaatatgaatgtctgcgtgtgaaaaat 360
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 501 gaaaaactgaacttttatagtttttttgttttctaatatgaatgtctgcatgtgaaaaat 560
Query: 361 aactgaaaactccaccgtctgccttcaccatcctccagtgtcacagtcactggaagataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aactgaaaactccaccgtctgccttcaccatcctccagtgtcacagtcactggaagataa 620
Query: 421 tcaatctccaatattggataggatccggtgt 451
|||||||||||||||||||||||||||||||
Sbjct: 621 tcaatctccaatattggataggatccggtgt 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
