Query= MSMg01no362_h12.b1 MSMg01no362_h12.b1 CHROMAT_FILE:
MSMg01no362_h12.b1 PHD_FILE: MSMg01no362_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:51 2005
(324 letters)
>mm_chr7_142975949_142976671
Length = 723
Score = 505 bits (261), Expect = e-147
Identities = 303/317 (95%), Gaps = 5/317 (1%)
Strand = Plus / Minus
Query: 5 gaattcattgt-gtagttatagtcatgattctgttggacttttctcttgacagctcattt 63
||||||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 480 gaattcattgtag-agttatagtcatgattctgttggacttttctcttgacagttcattt 422
Query: 64 tcctcttcttactagtaagtaaaaaatttaaagctatgaatttacctctactttctgctt 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcctcttcttactagtgagtaaaaaatttaaagctatgaatttacctctactttctgctt 362
Query: 124 tggcagaagccatcttttttattctccttttctcctgttctgagagtcaccttgtaactc 183
| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 361 tatcagaagccatcttttttattctcctttt-tcctgttctgagagtcaccttgtaactc 303
Query: 184 tgctcata-tttttttaagtttttttataaggctatattaatgtataaacatgggcttca 242
|||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||
Sbjct: 302 tgctcatattttttttacg-ttttttataaggctatattaatgtgtaaacatgggcttca 244
Query: 243 ctggacagtatctctaagtatgccataccttgcccagcattgattgattgattgtttgtt 302
|||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||
Sbjct: 243 ctggacagtatctctaagtatgccataccttgcccagcattgtttgtttgtttgtttgtt 184
Query: 303 tgtttgtttgtttgttt 319
|||||||||||||||||
Sbjct: 183 tgtttgtttgtttgttt 167
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_h12.g1 MSMg01no362_h12.g1 CHROMAT_FILE:
MSMg01no362_h12.g1 PHD_FILE: MSMg01no362_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:51 2005
(448 letters)
>mm_chr7_142847410_142848257
Length = 848
Score = 839 bits (434), Expect = 0.0
Identities = 447/456 (98%), Gaps = 8/456 (1%)
Strand = Plus / Plus
Query: 1 tgagttcaatccctgaaacccgcatcatggaagaacagagctgtttcttgaaaaccaccg 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tgaggtcaatccctgaaacccgcatcatggaagaacagagctgtttcttgaaaaccaccg 252
Query: 61 cgttcatggcatagcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg--------ca 112
|||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 253 cgttcatggcatagcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgca 312
Query: 113 caagagcaaacaaatgttatctaaaattttaagaagaaaacatatgatagaaaagatgga 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 caagagcaaacaaatgttatctaaaattttaagaagaaaacatatgatagaaaagatgga 372
Query: 173 ggagccccgtaaattttatactggaaacaaatgattccctctcgtgttcctcccaccctg 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ggagccccgtaaattttatactggaaacaaatgattccctctcgtgttcctcccaccctg 432
Query: 233 cctctctgtggccctcagttgtgcagagtcctgctgcctgtagagatacagtgtaaggta 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 cctctctgtggccctcagttgtgcagagtcctgctgcctgtagagatacagtgtaaggta 492
Query: 293 agagcacagacagcctggctcctctctccatggccacactcctacgacacccctctcctg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agagcacagacagcctggctcctctctccatggccacactcctacgacacccctctcctg 552
Query: 353 tccaaaccagccaggccagttctcagagaagacatttaagtttcccacccctccctctct 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tccaaaccagccaggccagttctcagagaagacatttaagtttcccacccctccctctct 612
Query: 413 ctggtctgacaccctctcctaacggtcatggaaggg 448
||||||||||||||||||||||||||||||||||||
Sbjct: 613 ctggtctgacaccctctcctaacggtcatggaaggg 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
