XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
AGTTCATTATCTCTTGAGAATAAAGTCAGAAACTGGAGGGGCCTCTGCAT
TTTCTCGCTGAGAGCAGTACTTAAAACAAATAACATCACTTCCTCAAACA
TTTATAGATTAAACTAAATGGCATTAATTACTGTAAATCTCCTATTTGTC
TGGAGAATGAGGGGTTGGGGGAAAGAAAATGCTCTCTCTAAATCCCTGAG
TTTCGTAGCAAGATCTCTCCTCTCTCACAAAAATGCCTCGTATCGTTGGG
GGCAAAATGTTTAATCGTGGAATGAACGGGAAGTGAATGGCAAGAGGAGC
TAACAAGGCTCGCTGTGAGGGGCTCGCTAACTTTTTATAGAGCAGTGTTT
TGCAAAGCTCGGAAGCAGAAGGTTGCTTTTGAAAGCCCTTATTAAAACGC
AATCCCTGCCACATATGTAGGAGCTGTCTTGGGAAATACCTGCTTTACCC
GTGTTTGAAAAGCTTAAAACCTGCCAAGGAGAGGTGAAGAAGCCAACGTT
GGGCTGGGCCCAGGAAATCTGCCCCAGGGCCTCACCAAGGAAGCTGGGGA
TTGACAGGTCATGTGCTGAACCGCTTGCTTGTTTTCCAAAGTGCACCTTG
AGGTGTGCTTCCGATGCGTGCGGGGCACATGACACACTATAACATCATTC
CTACAAGCAGTTGTTTTTTAATAGACGAACCTCTGCAT

CCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTCTCCCTCGGAAGTTGTCCAAAGT
GGTTGGCTCCACCACAAGTTGGGATTCACCTCTTTGCTTTTAGAGTAAGG
GAGAGAAGGGCATAGGGTTGAAGGCTTGCACTTTGGGTTTTACTCCAGGG
GAACCCTACCTTGAGCTCAGCAAGAGGCAGAATGGAGGGCCAGCAGGAAC
TTTCATGTCTCTGCCCATTCTTGCTACAGCTTATCCTAACACTAGGAGCC
ATGTAAGCTGATAGATTTTTTTTGGCCAACAGATTTAGCCAGATGGCATC
AACCAGACCCTCCCCCAGGACAGACTGGTTACATCATGGCTCTGCTGTGC
TAGGTGCATTAAAATGCTACTGTGTGACAGAGGGAAGGATACAGACACCT
TATAGAGCTAAACATTCTTGCATACCACTGTTGGCTAGATGCTCGCATAG
CTTATGGGCTTGATGCTTAGGCCCCAGGTCATTCATATGGCCCCTAAGTC
AGGTGTTCTCTTACTATTATCTACCGATCTGCCGAACCGTTGTTGGTCGC
TCCGCCATGTGTAGTTTTTGCCATGCCGAGGCTGCTCCTTGGCTTGCACT
TATATGCCTCTATTCCTCAGCTTAACGTATCCGGTTCGCCAATTTTTCCA
TGCCCACCAATTTTGCTTCCCTTGTTCTTGTCCCCCTCTTCGTCGTCTCC
ACAGTTTTCCTGCTCTCTACTACCCTCCC

Query= MSMg01no363_k01.b1 MSMg01no363_k01.b1 CHROMAT_FILE:
MSMg01no363_k01.b1 PHD_FILE: MSMg01no363_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:24 2005
         (558 letters)



>mm_chr7_37724586_37725543
          Length = 958

 Score = 1064 bits (550), Expect = 0.0
 Identities = 553/554 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagttcattatctcttgagaataaagtcagaaactggaggggcctctgcattttc 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 gaattcagttcattagctcttgagaataaagtcagaaactggaggggcctctgcattttc 699

                                                                       
Query: 65  tcgctgagagcagtacttaaaacaaataacatcacttcctcaaacatttatagattaaac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 tcgctgagagcagtacttaaaacaaataacatcacttcctcaaacatttatagattaaac 639

                                                                       
Query: 125 taaatggcattaattactgtaaatctcctatttgtctggagaatgaggggttgggggaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 taaatggcattaattactgtaaatctcctatttgtctggagaatgaggggttgggggaaa 579

                                                                       
Query: 185 gaaaatgctctctctaaatccctgagtttcgtagcaagatctctcctctctcacaaaaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaaaatgctctctctaaatccctgagtttcgtagcaagatctctcctctctcacaaaaat 519

                                                                       
Query: 245 gcctcgtatcgttgggggcaaaatgtttaatcgtggaatgaacgggaagtgaatggcaag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gcctcgtatcgttgggggcaaaatgtttaatcgtggaatgaacgggaagtgaatggcaag 459

                                                                       
Query: 305 aggagctaacaaggctcgctgtgaggggctcgctaactttttatagagcagtgttttgca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aggagctaacaaggctcgctgtgaggggctcgctaactttttatagagcagtgttttgca 399

                                                                       
Query: 365 aagctcggaagcagaaggttgcttttgaaagcccttattaaaacgcaatccctgccacat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 aagctcggaagcagaaggttgcttttgaaagcccttattaaaacgcaatccctgccacat 339

                                                                       
Query: 425 atgtaggagctgtcttgggaaatacctgctttacccgtgtttgaaaagcttaaaacctgc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 atgtaggagctgtcttgggaaatacctgctttacccgtgtttgaaaagcttaaaacctgc 279

                                                                       
Query: 485 caaggagaggtgaagaagccaacgttgggctgggcccaggaaatctgccccagggcctca 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 caaggagaggtgaagaagccaacgttgggctgggcccaggaaatctgccccagggcctca 219

                         
Query: 545 ccaaggaagctggg 558
           ||||||||||||||
Sbjct: 218 ccaaggaagctggg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 958
Length adjustment: 10
Effective length of query: 548
Effective length of database: 948
Effective search space:   519504
Effective search space used:   519504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no363_k01.g1 MSMg01no363_k01.g1 CHROMAT_FILE:
MSMg01no363_k01.g1 PHD_FILE: MSMg01no363_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:24 2005
         (242 letters)



>mm_chr7_37541878_37542519
          Length = 642

 Score =  443 bits (229), Expect = e-129
 Identities = 235/237 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tttctccctcggaagttgtccaaagtggttggctccaccacaagttgggattcacctctt 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctccctaggaagttgtccaaagtggttggctccaccacaagttgggattcacctctt 260

                                                                       
Query: 61  tgcttttagagtaagggagagaagggcatagggttgaaggcttgcactttgggttttact 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcttttagagtaagggagagaagggcatagggttgaaggcttgcactttgggttttact 320

                                                                       
Query: 121 ccaggggaaccctaccttgagctcagcaagaggcagaatggagggccagcaggaactttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaggggaaccctaccttgagctcagcaagaggcagaatggagggccagcaggaactttc 380

                                                                    
Query: 181 atgtctctgcccattcttgctacagcttatcctaacactaggagccatgtaagctga 237
           |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 atgtctctgcccattcttgctacagcttattctaacactaggagccatgtaagctga 437


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space:   147489
Effective search space used:   147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)