Query= MSMg01no368_d14.b1 MSMg01no368_d14.b1 CHROMAT_FILE:
MSMg01no368_d14.b1 PHD_FILE: MSMg01no368_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:36 2005
(604 letters)
>mm_chr11_34001500_34002503
Length = 1004
Score = 1122 bits (580), Expect = 0.0
Identities = 595/600 (99%)
Strand = Plus / Minus
Query: 5 gaattctccaattagaatgctatctctgcacacctacatgaacaatagatcttcttaaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gaattctccaattagaatgctatctctgcacacctacatgaacaatagatcttcttaaac 609
Query: 65 aacccacctctttcctgctgttatctatagggaatttccagcatatgagccacacgggac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aacccacctctttcctgctgttatctatagggaatttccagcatatgagccacacgggac 549
Query: 125 tgaggtgaagtttccacttcagaataaaggagaggaggggaaagaggacatgctcatgtg 184
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 548 tgaggtgaagtttccacttcagaataaagaagaagaggggaaagaggacatgctcatgtg 489
Query: 185 gtaagccttgctcataagttagttctgttctgaaactatactcttcctgctgttgtgatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtaagccttgctcataagttagttctgttctgaaactatactcttcctgctgttgtgatg 429
Query: 245 tgaaattcaccttgcttttgtaaggcactgatgccaacacattccattttgtattgttga 304
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tgaaattcaccttgcttttataaggcactgatgccaacacattccattttgtattgttga 369
Query: 305 ttgtcttcagctcagaaagtgaacatcactcactctgtgctggccaccgcacatttatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 ttgtcttcagctcagaaagtgaacatcactcactctgtgctggccaccgcacatttatgt 309
Query: 365 gcccgtatctacattattagttgtgtatttaagttcaatggccaattaaaactaaacgtc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gcccgtatctacattattagttgtgtatttaagttcaatggccaattaaaactaaacgtc 249
Query: 425 ctgggagccagggtgggctcatttactatccagagatggtctcctcagtgtgctaggcaa 484
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 248 ctgggagccagggtgggctcatttaatatccagagatggtctcctcagtgtgctaggcaa 189
Query: 485 ccctaacaagacaccactcacagagcatcctgagcaacagaaacagcctctcgtagttct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ccctaacaagacaccactcacagagcatcctgagcaacagaaacagcctctcgtagttct 129
Query: 545 acaggcaggaaggtcaaggtcgaggggtgcaaagctctgggtccgtctgaggcttcttgg 604
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 128 acaggcaggaaggtcaaggttgaggggtgcaaagctctgggtccgtctgaggcttcttgg 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1004
Length adjustment: 10
Effective length of query: 594
Effective length of database: 994
Effective search space: 590436
Effective search space used: 590436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_d14.g1 MSMg01no368_d14.g1 CHROMAT_FILE:
MSMg01no368_d14.g1 PHD_FILE: MSMg01no368_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:36 2005
(551 letters)
>mm_chr7_134470641_134471591
Length = 951
Score = 949 bits (491), Expect = 0.0
Identities = 540/565 (95%), Gaps = 14/565 (2%)
Strand = Plus / Plus
Query: 1 ccacctgtcccttctgtccagcaagtggcctcctttattgacttttattgacctctttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ccacctgtcccttctgtccagcaagtggcctcctttattgacttttattgacctctttga 246
Query: 61 ttgaccaaatcaagaaccaattagggagccagactttagtatcagcacctctccctacag 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttgaacaaatcaagaaccaattagggagccagactttagtatcagcacctctccctacag 306
Query: 121 tggtgcacatgg--------------aaagatggccatttagacagtaagctgagttgac 166
|||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 307 tggtgcacatgggaagatgcacatggaaagatggccatttagacagtaaactgagttgac 366
Query: 167 acagtaatgaaggtggcatgtagtactgaggacccagctcccaaggtatgaccctaattc 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 acagtaatgaaggtggcatgtagtactgaggacccagctcccaaggtatgaccctaattc 426
Query: 227 cagagcttctgacctgtctctctactggccttagtccagaggtctagatgacaaggtgcc 286
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cagaacttctgacctgtctctctactggccttagtccagaggtctagatgacaaggtgcc 486
Query: 287 tctgaaggcaccagcacagggctggaggcccagaggcttcttggggtcccgactgcatga 346
||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct: 487 tctgaaggccccagcacagtgctggaggcccagaggcttcttggggttccgactgcatga 546
Query: 347 cttcatccttccatctctgcacgtctctctccacaggcaagagaactccaccctctatat 406
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 547 cttcatccttccatctctgcacgtctctctccacaggcaggagaactccactctctatat 606
Query: 407 cagtttcacccctaaaggtcccaagacccaacaagtccagcatgtctaccaggtatgagc 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cagtttcacccctaaaggtcccaagacccaacaagtccagcatgtctaccaggtatgagc 666
Query: 467 ttctgaaaggaaggatcctcaaaggcacactttatttttaaaatttttatctatttttat 526
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 667 ttccgaaaggaaggatcctcaaaggcacactttatttttaaaaattttatctatttttat 726
Query: 527 aatatatttgtattttgactgtatg 551
||| |||||||||||||||||||||
Sbjct: 727 aatgtatttgtattttgactgtatg 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
