XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCATA
GAATTACAAGAAGAAAGTACAAATTGAGTTTCTCTACTATAAATCAGCCT
TGGCTACGTGAGCTATGTGCAGTTATTACCACTGGGAAGAGGAGGATTTA
TAGTTGTGGTTCCCTAGGGCATTCTACAAAAAGAAAAAAAGACAATTCCA
CACACCCCTTTCAGGGCCTATAATGGAAATGCAGCTAAAGTTTAAAATAA
CCTGTAGCTACCTTCAACCATTTTGTGAATTTCCACAAAATACATAAGAT
ATAGAATGACAGATATGAATTTTCATATTCAATATAATTGCATTAAAATA
ATATATGTCATTTTATTACCTCTTTTATGTCTATTTGCACACATTCATGT
ATGTGTCTATGTGGGGATCAGTAAACACGTATGCATAGATGTGTACGTAA
GTGGATCCTAGAGGACAATAGCCATCATTCCTCAGATATCATCTATCATT
TCTTCTGATAAGGGGTCTTTTAATGGTATGCTGCTCACCAAGGAAGCAAA
TGATTTTAGATCTGTCTGTCCCTGTCTCCTTGTGACTGTAATTACAAACG
CATTGTGTGTTGCCAAGCAAGGTTTTACATGCATCCTAGGGTTGGGAACT
CAGGCAGGGCCTTATTGCTTCCAATACAAACATTTTATATAGGAGCGGAC
CATATTTTCCACAAAGTCCTAGAGAAAAAGT

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGAAATACCGAATGGCAG
AGAAGCACCTGAAAAAATGTTCAACATCATTTTTCATAAGGGAAATGCAA
ATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGAT
CAAAAATTCAGGTGACAGCAGATGCTGGCACGGATGTGGAGAAAGAGGAA
CACTCCTCCATTGTTGGTGGGATTGCAAGATTTTACAACCACTTTGGAAA
TCAGTCTGGTGGTTCCTTAGAAAATTGGACATAGTACTACCAGAGCATCC
AGCAATACCTCTCCTTGGTATATATCCAGAAGATGTCCCAACCTGTAAGA
AGGACACATGCTTCACTGTGTTCATGGCAGCCTTATTTATAATAGCCAGA
AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGAAACAGAAAAT
GTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGT
GAAGTAACACAATCATAAAGAACTCACACAATATGTACTCACTGATAAGT
GGAAATAACCCAAAACTTAAAATACCCAAGATATAAGATACAATTTGCTT
AACAATGAAACTCTTGAAAAAAGGAGACCGGAATGTGGAACCTATGCCCC
C

Query= MSMg01no368_k09.b1 MSMg01no368_k09.b1 CHROMAT_FILE:
MSMg01no368_k09.b1 PHD_FILE: MSMg01no368_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:09 2005
         (616 letters)



>mm_chr7_61239298_61240313
          Length = 1016

 Score = 1007 bits (521), Expect = 0.0
 Identities = 580/601 (96%), Gaps = 3/601 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatagaattacaagaagaaagtacaaattgagtttctctactataaatcagcctt 64
           ||||||||||||  | ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 gaattcatagaagcagaagaaaaaagtacaaattgagtttctctattataaatcagcctt 542

                                                                       
Query: 65  ggctacgtgagctatgtgcagttattaccactgggaagaggaggatttatagttgtggtt 124
           |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 541 ggctacttgagctatgtgcagttattaccgctgggaagaggaggatttatagttgtggtt 482

                                                                       
Query: 125 ccctagggcattctacaaaaagaaaaaaagacaattccacacacccctttcagggcctat 184
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 481 ccctagggcattctacaaaaagaaaaaaagacaattccacacaccccttttagggcctgt 422

                                                                       
Query: 185 aatggaaatgcagctaaagtttaaaataacctgtagctaccttcaaccattttgtgaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatggaaatgcagctaaagtttaaaataacctgtagctaccttcaaccattttgtgaatt 362

                                                                       
Query: 245 tccacaaaatacataagatatagaatgacagatatgaattttcatattcaatataattgc 304
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tccacaaaattcataagatatagaatgacagatatgaattttcatattcaatataattgc 302

                                                                       
Query: 305 attaaaataatatatgtcattttattacctcttttatgtctatttgcacacattcatgta 364
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 attaaaataatatatgtcattttattacctcttttatgtctatttgcacccattcatgta 242

                                                                       
Query: 365 tgtgtctatgtggggatcagtaaacacgtatgcatagatgtgtacgtaagtggatcctag 424
           ||||||| ||||||||||||||||||||||||||||| ||||||  ||||||||||||||
Sbjct: 241 tgtgtctgtgtggggatcagtaaacacgtatgcataggtgtgtatataagtggatcctag 182

                                                                       
Query: 425 aggacaa---tagccatcattcctcagatatcatctatcatttcttctgataaggggtct 481
           |||||||   |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aggacaaacttagcgatcattcctcagatatcatctatcatttcttctgataaggggtct 122

                                                                       
Query: 482 tttaatggtatgctgctcaccaaggaagcaaatgattttagatctgtctgtccctgtctc 541
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttaatggtatgctgttcaccaaggaagcaaatgattttagatctgtctgtccctgtctc 62

                                                                       
Query: 542 cttgtgactgtaattacaaacgcattgtgtgttgccaagcaaggttttacatgcatccta 601
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cttgtgactgtaattacaaatgcattgtgtgttgccaagcaaggttttacatgcatccta 2

            
Query: 602 g 602
           |
Sbjct: 1   g 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)