Query= MSMg01no368_m13.b1 MSMg01no368_m13.b1 CHROMAT_FILE:
MSMg01no368_m13.b1 PHD_FILE: MSMg01no368_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:19 2005
(535 letters)
>mm_chr7_76105779_76106714
Length = 936
Score = 959 bits (496), Expect = 0.0
Identities = 526/540 (97%), Gaps = 9/540 (1%)
Strand = Plus / Plus
Query: 1 gtattcttttgcattgctgtgtagtattccctttatctgaaagtatttgagttgtttcca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtattcttttgcattgctgtgtagtattccctttatctgaaagtatttgagttgtttcca 260
Query: 61 accttacacttcacttaggtctgtgaatggatatttttgtcatctatctcaaggaatcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accttacacttcacttaggtctgtgaatggatatttttgtcatctatctcaaggaatcac 320
Query: 121 caaagagtagacttactgtatcatactatggtttgatattttccttttcaaaatattgat 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaagagtagacttactggatcatactatggtttgatattttccttttcaaaatattgat 380
Query: 181 tgacaaatcatttcttcaaagtatttctagcctctcaccttcccatcagaggtatggaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgacaaatcatttcttcaaagtatttctagcctctcaccttcccatcagaggtatggaag 440
Query: 241 acccactgtttttt----ctgtacttggcgtagtgagcctttaaatgtatccagttgaca 296
|||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acccacagtt----gggcctgtacttggcgtagtgagcctttaaatgtatccagttgaca 496
Query: 297 agatgcatgggtactttttaggtgtaatataaagatgcacatatttgacgactattaaag 356
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 497 agatgcatgggtactttttaggtgtaatataaagatgcacatatttgatgactattaaag 556
Query: 357 tcagacaacttttcttgtcttaattgtcatttattaggcttttggtgaaatattttttt- 415
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 557 tcagacaacttttcttgtcttaattgtcatttattagacttttggtgaaatatttttttt 616
Query: 416 caaatatctgcatttgtggaggtagctcagtagtacagattatttgttgggatccctaag 475
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 617 caaatatctgcatttgtggaggtatctcagtagtacagattatttgttgggatccctaag 676
Query: 476 attgtgactttgatccccaatactacaaatgtgcatgtaccacacacacacacacacaca 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 attgtgactttgatccccaatactacaaatgtgcatgtaccacacacacacacacacaca 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 936
Length adjustment: 10
Effective length of query: 525
Effective length of database: 926
Effective search space: 486150
Effective search space used: 486150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_m13.g1 MSMg01no368_m13.g1 CHROMAT_FILE:
MSMg01no368_m13.g1 PHD_FILE: MSMg01no368_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:06:19 2005
(341 letters)
>mm_chr7_76305166_76305906
Length = 741
Score = 605 bits (313), Expect = e-177
Identities = 322/325 (99%)
Strand = Plus / Minus
Query: 1 acttgaagaatttagcaagatgtctgtgaatgtaatctctaagatgttaattatgtccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttgaagaatttagcaagatgtctgtgaatgtaatctctaagatgttaattatgtccat 266
Query: 61 tataaaattaggaaaatgttacaaattcctttcaaactgtgttttctacaaaatctttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tataaaattaggaaaatgttacaaattcctttcaaactgtgttttctacaaaatctttta 206
Query: 121 ccttggaggacatatggagggacccatggctctagctgcacatgtaacaaaggatggcct 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ccttggaggacgtatggagggacccatggctctagctgcacatgtaacaaaggatggcct 146
Query: 181 tgtcaagcatcaatgggaggagacactcttggtcctgtgaaggcttgatgcccaggtgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 tgtcaagcatcaatgggaggagacactcttggtcctgtgaaggcttgatgcccaggtgta 86
Query: 241 ggggaatgtcaagacaaggaggctggagtgtgtgagtgggtaggagagcaccctcataga 300
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 85 ggggaatgccaagacaaggaggctggagtgtgtgagtgggtgggagagcaccctcataga 26
Query: 301 agcaggaagagggggatgatagaag 325
|||||||||||||||||||||||||
Sbjct: 25 agcaggaagagggggatgatagaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
