Query= MSMg01no369_f13.b1 MSMg01no369_f13.b1 CHROMAT_FILE:
MSMg01no369_f13.b1 PHD_FILE: MSMg01no369_f13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:03 2005
(315 letters)
>mm_chr7_73005678_73006392
Length = 715
Score = 574 bits (297), Expect = e-168
Identities = 309/313 (98%)
Strand = Plus / Plus
Query: 1 gtctgggagccaggtgctcttggaacctgagcgttggtgaggtagcttcttttgtgactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtctgggagccaggtgctcttggaacctgagcgttggtgaggtagcttcttttgtgactc 260
Query: 61 aaggccttctctgccttgttttgctgtcttcggtttcctgggccccctcttggattaatc 120
||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 261 aaggccttctctgccttgttttgctgtcttcggtttcctggtccccctcttgtattaatc 320
Query: 121 aggctgaaggtttgctttctgtatgaggccagttgggaccaatgggccgtccgaggcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggctgaaggtttgctttctgtatgaggccagttgggaccaatgggccgtccgaggcttg 380
Query: 181 cagccatcccagcctctcattgcatcttcacagtatgaacgagtccccggtttctccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagccatcccagcctctcattgcatcttcacagtatgaacgagtccccggtttctccagg 440
Query: 241 ctgttcctggagggaggtttgaggatgagtcaacttacattcacactgactggtcctagc 300
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgttcctggagggaggggtgaggatgagtcaacttacattcacactgactggtcctagc 500
Query: 301 tcagtgggtactt 313
|||||||||||||
Sbjct: 501 tcagtgggtactt 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_f13.g1 MSMg01no369_f13.g1 CHROMAT_FILE:
MSMg01no369_f13.g1 PHD_FILE: MSMg01no369_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:03 2005
(498 letters)
>mm_chr7_73109163_73110061
Length = 899
Score = 957 bits (495), Expect = 0.0
Identities = 498/499 (99%), Gaps = 1/499 (0%)
Strand = Plus / Minus
Query: 1 cttgcatgttttcaataaggaatggaggaaaatagagagtgatgaattgctaagtatgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cttgcatgttttcaataaggaatggaggaaaatagagagtgatgaattgctaagtatgag 499
Query: 61 aatacaactttccacacaagtaactaattactgcagggcctcaggacacagaagctaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aatacaactttccacacaagtaactaattactgcagggcctcaggacacagaagctaaca 439
Query: 121 tttggt-gggggggctggaaattgaaaatatttagctgtttttgctaaattggtagcatt 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tttggtggggggggctggaaattgaaaatatttagctgtttttgctaaattggtagcatt 379
Query: 180 tgagtattttggtctttagctgaatggaaatcagcatacaagcatgcataattacaagaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgagtattttggtctttagctgaatggaaatcagcatacaagcatgcataattacaagaa 319
Query: 240 tttacacatctcaaatattctctctgaatcacttaaaaactcatctagaacaaaagattg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tttacacatctcaaatattctctctgaatcacttaaaaactcatctagaacaaaagattg 259
Query: 300 ggttgttatgtgacagttgatgtctaaactgtttctgactccacagttgcacacaaggtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ggttgttatgtgacagttgatgtctaaactgtttctgactccacagttgcacacaaggtg 199
Query: 360 tttttatttggatggggaatgttcccccacaggctcacaagtttgagtgcttggtcactg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tttttatttggatggggaatgttcccccacaggctcacaagtttgagtgcttggtcactg 139
Query: 420 gctgatggcattgattgaggggggaggctgtggaacctctcatagagtgagcctgtcagc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 gctgatggcattgattgaggggggaggctgtggaacctctcatagagtgagcctgtcagc 79
Query: 480 aagaaagaggtcactggag 498
|||||||||||||||||||
Sbjct: 78 aagaaagaggtcactggag 60
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 899
Length adjustment: 10
Effective length of query: 488
Effective length of database: 889
Effective search space: 433832
Effective search space used: 433832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
