Query= MSMg01no371_k20.b1 MSMg01no371_k20.b1 CHROMAT_FILE:
MSMg01no371_k20.b1 PHD_FILE: MSMg01no371_k20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:13 2005
(426 letters)
>mm_chr7_76327624_76328450
Length = 827
Score = 694 bits (359), Expect = 0.0
Identities = 408/427 (95%), Gaps = 7/427 (1%)
Strand = Plus / Minus
Query: 4 gttaaagaagattagtcgtttcctgttgagagatatttcaagtgaagcatttcaatgctt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gttaaagaagattagtcgtttcctgttgagagatatttcaagtgaagcatttcaatgctt 568
Query: 64 ggcaccttattaatcattttacttcccactttaggtatggtgttctgagtgctatgaagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ggcaccttattaatcattttacttcccactttaggtatggtgttctgagtgctatgaagg 508
Query: 124 ttcaagccaaacccacca---attcctttaattttcacctcataggttcctttgcaacat 180
|||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 507 ttcaagccaaacccaccacttcttcctttagttttcacctcataggtttctttgcaacat 448
Query: 181 accctctgcagaaacttccaaaggagtt-gcccaaaataacagcctttctacttattcca 239
| |||||| ||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 447 atcctctgtagaaacttccaaaggagttagcc---aataacagcctttctacttattcca 391
Query: 240 aggactgtgactgcttgtttagttatagacacatgaaaatcgtgttatatttgttgttca 299
||||||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 390 aggactgtgacggcttgtttagttatagacacatgaaaaccatgttatatttgttgttca 331
Query: 300 accaatcagcatcctgagcttggagtgaaagctgcatcaactttggaatccaagaggtga 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 accaaccagcatcctgagcttggagtgaaagctgcatcaactttggaatccaagaggtga 271
Query: 360 gaaggaaagtttgcctggacagtgcaagctaatagtgacatttcattgtgtggatctatt 419
|||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 270 gaaggaaagtttgcctggacagcgcaagctaatagtgacatttcattgtgcagatctatt 211
Query: 420 ttattgt 426
|||||||
Sbjct: 210 ttattgt 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 827
Length adjustment: 9
Effective length of query: 417
Effective length of database: 818
Effective search space: 341106
Effective search space used: 341106
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_k20.g1 MSMg01no371_k20.g1 CHROMAT_FILE:
MSMg01no371_k20.g1 PHD_FILE: MSMg01no371_k20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:13 2005
(485 letters)
>mm_chr7_76172817_76173701
Length = 885
Score = 913 bits (472), Expect = 0.0
Identities = 478/480 (99%)
Strand = Plus / Plus
Query: 6 gaattccatcattgctattttatcttggcccaaatcagaaggcttgtgtcattctaaaaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccatcattgctattttatcttggcccaaatcagaaggcttgtgtcattctaaaaa 265
Query: 66 gatccttttgctgggttctctttgctactagacaaaagtatccaacgtgatataaatacc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gatccttttgctgggttctctttgctactagacaaaagtatccaacgtgatataaatacc 325
Query: 126 aaccatggtattttgggaagaaaactgtgtcagtgtcaaagcacctgactttaaatctca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaccatggtattttgggaagaaaactgtgtcagtgtcaaagcacctgactttaaatctca 385
Query: 186 ttgttaccttataaaatcccaaacccttcagtatgtcacagcatccttgtgcttctgatc 245
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttgttaccttataaaatcccaaacccttcagtatgtcacagcatccttgtgcttctgatt 445
Query: 246 cttcatctgtagagtggagacattaaaagataccatgttatcagactagatgggaattct 305
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cttcatctgtagagaggagacattaaaagataccatgttatcagactagatgggaattct 505
Query: 306 gtatttttacattctttgtgaaatgaaaagctttgagcaaatggctattattttagttat 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtatttttacattctttgtgaaatgaaaagctttgagcaaatggctattattttagttat 565
Query: 366 tatttagcctcctgcaataaaaacaaaatcacaagagctttctcttttcatctgaaacaa 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tatttagcctcctgcaataaaaacaaaatcacaagagctttctcttttcatctgaaacaa 625
Query: 426 catctaatacattattacacaacttcaactacattatttacaaaaatgcttttatgtttg 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 catctaatacattattacacaacttcaactacattatttacaaaaatgcttttatgtttg 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space: 415625
Effective search space used: 415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
