Query= MSMg01no372_b11.b1 MSMg01no372_b11.b1 CHROMAT_FILE:
MSMg01no372_b11.b1 PHD_FILE: MSMg01no372_b11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:46 2005
(573 letters)
>mm_chr7_77572815_77573780
Length = 966
Score = 1042 bits (539), Expect = 0.0
Identities = 562/573 (98%), Gaps = 7/573 (1%)
Strand = Plus / Minus
Query: 1 tcctagaaccttaaaatgcttttgtatctacattgtcattaaaccagatcttgtttctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tcctagaaccttaaaatgcttttgtatctacattgtcattaaaccagatcttgtttctga 707
Query: 61 gtacctttaattttcctatcttcaagatcacttttaaaaatcaaattagatcttttgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 gtacctttaattttcctatcttcaagatcacttttaaaaatcaaattagatcttttgaag 647
Query: 121 gcccttaaattgcaacaaccattcatttttccatatatgttcgggcttcagcctttacag 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 gcccttaaattgcaacagccattcatttttccatatatgttcgggcttcagcctttacag 587
Query: 181 cctggattgtgtggccaattaatggagtatctcaaggaagctctaatcattttgagaagc 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 586 cctggattgtgtggccaattaatggagtatctcaaggaagcactaatcattttgagaagc 527
Query: 241 taagactataaaaagccagcagcctattttcagtataactgattggattgggaataagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 taagactataaaaagccagcagcctattttcagtataactgattggattgggaataagct 467
Query: 301 agaaagacaatgtccaatatccatgctaactttttcaggtgggcttgtgccagtgcacac 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 466 agaaagacaatgtccaatatccatgctaactttttcaggtgggcttgtgacagtgcacac 407
Query: 361 tcacagacagaaaagcatccacagttacgtaagttgctgttcactgacagactctttgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tcacagacagaaaagcatccacagttacgtaagttgctgttcactgacagactctttgaa 347
Query: 421 gttcaaattgagttgcctcctcttccgggttcagcctcgggcctcgggcaggcatgaaga 480
||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 346 gttcaaattgagttgcctcctcttccgggttcagcctcggg---cg----ggcatgaaga 294
Query: 481 aggcagcgaggagagcaggtttacactgatttttatcagctgagataattcatttggcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aggcagcgaggagagcaggtttacactgatttttatcagctgagataattcatttggcaa 234
Query: 541 aggagacatctattactagatgtttttcctatg 573
|||||||||||||||| ||||||||||||||||
Sbjct: 233 aggagacatctattaccagatgtttttcctatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 573
Length of database: 966
Length adjustment: 10
Effective length of query: 563
Effective length of database: 956
Effective search space: 538228
Effective search space used: 538228
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_b11.g1 MSMg01no372_b11.g1 CHROMAT_FILE:
MSMg01no372_b11.g1 PHD_FILE: MSMg01no372_b11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:46 2005
(433 letters)
>mm_chr7_77460877_77461709
Length = 833
Score = 775 bits (401), Expect = 0.0
Identities = 425/433 (98%)
Strand = Plus / Plus
Query: 1 catctgtcactttagaggatgcagcatctcatctccgaattgaaatcaagttcaacagcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 catctgtcactttagaggatgcagcatctcatctccgaattgaaatcaagtttaacagcc 260
Query: 61 gaagtaccacttcatcatcagcaatgtggaaagctgcaaatcacttaaactccccttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaagtaccacttcatcatcagcaatgtggaaagctgcaaatcacttaaactccccttgca 320
Query: 121 tccggatgaacctgagaattgcatctacaatagctttaaaaaagggggtggtggctcatg 180
|||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccggacgaacctgagaattgcacctacaatagctttaaaaaagggggtggtggctcatg 380
Query: 181 gttctcagccatggcagaggggtcagttcacggtttcttcggagttggagcctcctcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttctcagccatggcagaggggtcagttcacggtttcttcggagttggagcctcctcttc 440
Query: 241 attggtcccaccacactgccattgccacaccaacacatcatattcctccttactctattt 300
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 441 attggtcccaccacactgccattgccacaccaacatgtcatattcctccttactctattt 500
Query: 301 caatctaagaaggaaaccccatgcaggtttctgaagagctgcgtgtggctaagaaagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatctaagaaggaaaccccatgcaggtttctgaagagctgcgtgtggctaagaaagcct 560
Query: 361 ggggttggaatgcagccctgtaaccccctcacaggggtggagaggaaacatatccagaga 420
|||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 ggggttggaacgcagccctgtaattccctcacaggggtggagaggaaacatatccagaga 620
Query: 421 ggactccaaatgc 433
|||||||||||||
Sbjct: 621 ggactccaaatgc 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
