Query= MSMg01no372_c07.b1 MSMg01no372_c07.b1 CHROMAT_FILE:
MSMg01no372_c07.b1 PHD_FILE: MSMg01no372_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:49 2005
(553 letters)
>mm_chr7_122683875_122684828
Length = 954
Score = 969 bits (501), Expect = 0.0
Identities = 537/549 (97%), Gaps = 1/549 (0%)
Strand = Plus / Plus
Query: 6 gaattcatctgtctctctacagtagttccacagttaaaagtaaataaataaacattttct 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcatctgtctctctacagtagttccacagttaaaagtaaataaataaacattttct 265
Query: 66 cataacttggtgccgggcaagtatttgtatgtataaaaggaatgagttgtcttatcaggc 125
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 266 cataacttagtgccgggcaagtatttgtatgtataaaaggaatgagttgtcttatcgggc 325
Query: 126 atacaccttccagtcaccccatttccacatttcttcaagaggccaagtgtctcctgtatg 185
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 326 atacaccttccagtcaccccatttccacatttcttcaagaggccaaatgtctcctgtatg 385
Query: 186 tcaaacagatctcattcacacccaggacag-tccagcatggcatgaactgaagaggcttc 244
|||| ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct: 386 tcaaccagatctcattcacacccaggacagatccagcgtggcatgaactgaagaggcttc 445
Query: 245 ctagaacccgccaggtctaccatgcttttcccaggctatgacttttacctcacgtcctct 304
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 446 ccagaacccgccaggtctaccatgcttttcccaggctatgacttttacctcatgtcctct 505
Query: 305 gctgctccctctcctatgacagtctggccacactagtctgtacacccttggctctccctg 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 506 gctgctccctctcctatgacagtctggccacactagtctgtacacccttggctctctctg 565
Query: 365 tctggagtgccttccgtcctgttcctgtggcttcaccatggcttccttcaggtctctctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tctggagtgccttccgtcctgttcctgtggcttcaccatggcttccttcaggtctctctc 625
Query: 425 ctgagtcttaggtccaggcagtcactactgccagtggcttctcccctttaactttcttct 484
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctgagtcttaggcccaggcagtcactactgccagtggcttctcccctttaactttcttct 685
Query: 485 tggctcctaacatgtattcactctgttttacatacttgcttgcctcttcatggtctcctt 544
||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 686 tggctcctaacatatattcactctgttttgcatacttgcttgcctcttcatggtctcctt 745
Query: 545 cccctgtta 553
|||||||||
Sbjct: 746 cccctgtta 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 954
Length adjustment: 10
Effective length of query: 543
Effective length of database: 944
Effective search space: 512592
Effective search space used: 512592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_c07.g1 MSMg01no372_c07.g1 CHROMAT_FILE:
MSMg01no372_c07.g1 PHD_FILE: MSMg01no372_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:49 2005
(503 letters)
>mm_chr7_122828749_122829651
Length = 903
Score = 629 bits (325), Expect = 0.0
Identities = 328/329 (99%)
Strand = Plus / Minus
Query: 1 ctgtcacccattcttctgtttttcaagaaggactgtgtttgtagagtttcagtgaaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgtcacccattcttctgtttttcaagaaggactgtgtttgtagagtttcagtgaaccca 270
Query: 61 caaatcctcatacagtgcttattttggggtttatatgatttcatatttcctaccactcag 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 caaatccccatacagtgcttattttggggtttatatgatttcatatttcctaccactcag 210
Query: 121 gcaggattgtttattttatgggtatgatagctttggccgcatgtatgtctgtgcaacgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gcaggattgtttattttatgggtatgatagctttggccgcatgtatgtctgtgcaacgca 150
Query: 181 tgtgtgtagtgcctaaggaggccagaagagggtattggatcccttacaacttacaagtta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tgtgtgtagtgcctaaggaggccagaagagggtattggatcccttacaacttacaagtta 90
Query: 241 cagatggttgttagctgtcaagtgggagctggaaatcaaatcggggcttctgcaaatgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 cagatggttgttagctgtcaagtgggagctggaaatcaaatcggggcttctgcaaatgca 30
Query: 301 gcaagtactcttaaacactgagccaccgt 329
|||||||||||||||||||||||||||||
Sbjct: 29 gcaagtactcttaaacactgagccaccgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space: 440249
Effective search space used: 440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
