Query= MSMg01no373_b03.b1 MSMg01no373_b03.b1 CHROMAT_FILE:
MSMg01no373_b03.b1 PHD_FILE: MSMg01no373_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:57 2005
(596 letters)
>mm_chr7_71127735_71128730
Length = 996
Score = 1118 bits (578), Expect = 0.0
Identities = 585/588 (99%), Gaps = 2/588 (0%)
Strand = Plus / Minus
Query: 9 gaattctcagctctgcctgcaccatgcctgcctgggtgctgccgtgtccctgtcttgatg 68
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gaattctcagctctgcctgcaccatgcctgcctgggtgctgccgtgtccctgtcttgatg 708
Query: 69 atactggactgaacctctgaacctgtaagccagccccaattaaatgttgttttttataag 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 atactggactgaacctctgaacctgtaagccagccccaattaaatgttgttttttataag 648
Query: 129 acttgcatcggtcacagtgtctgttcatagcagtaaaaccttaactaagacagatagcta 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 acttgcatcggtcacagtgtctgttcatagcagtaaaaccttaactaagacagatagcta 588
Query: 189 gtatcaacctctgttctctatgtgctcgcatatgtaccacacaagcatgtgcacgtgcac 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 gtatcaacctctgttctctatgtgctcgcatatgtaccacacaagcatgtgcacgtgcac 528
Query: 249 atacacactcaaacactcacacacaaataacctcaacccaaagacaaaatttctactcta 308
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 acacacactcaaacactcacacacaaataacctcaacccaaagacaaaatttctactcta 468
Query: 309 agaaactcaaaaaggagagaaaacaacataaattaaacagagaaagaaaataatagaaag 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agaaactcaaaaaggagagaaaacaacataaattaaacagagaaagaaaataatagaaag 408
Query: 369 tagagatgaaacagagagttgaaaccaacacacacacacacacacacacacacatacaca 428
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 407 tagagatgaaacagagagttgaaaccaacacacacacacacacacacacaca--tacaca 350
Query: 429 cacacacacaaatcaagaaaccacaagttagctctttttaaaagctgatcaagaaagggg 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 cacacacacaaatcaagaaaccacaagttagctctttttaaaagctgatcaagaaagggg 290
Query: 489 agggatttgccaagtattataatggaaaaactgatttccaacattgtacagatgagaggg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agggatttgccaagtattataatggaaaaactgatttccaacattgtacagatgagaggg 230
Query: 549 tcatgaactaactcaatgaatgatggtgtgtcaccagactgggtcatt 596
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tcatgaactaactcaatgaatgatggtgtgtcaccagactgggtcatt 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_b03.g1 MSMg01no373_b03.g1 CHROMAT_FILE:
MSMg01no373_b03.g1 PHD_FILE: MSMg01no373_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:57 2005
(412 letters)
>mm_chr7_70923017_70923828
Length = 812
Score = 758 bits (392), Expect = 0.0
Identities = 407/412 (98%)
Strand = Plus / Plus
Query: 1 accatttacaccttctttctcatctctttttcccagagagctattttatagaagggtcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accatttacaccttctttctcatctctttttcccagagagctattttatagaagggtcta 260
Query: 61 gacagctggctctaaagggataggatcctgattttgttaaataagacagtaatgcaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacagctggctctaaagggataggatcctgattttgttaaataagacagtaatgcaagga 320
Query: 121 aatgaggcctgacacccacacccacaacaccacagtggtgtgtggtatggttctagtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgaggcctgacacccacacccacaacaccacagtggtgtgtggtatggttctagtttg 380
Query: 181 ccccagcatttttggccaagtaggaggatgtttaggaagtgctcagacacagggaagcat 240
|||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ccccagcatttttggctatgtaggagggtgtttaggaagtgctcagacacagggaagcat 440
Query: 241 gaccagaacaaggggacctgtagaatcctggaagagatgaaccagatgtgtaactatctt 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaccagaacaaggggatctgtagaatcctggaagagatgaaccagatgtgtaactatctt 500
Query: 301 ctgctttgctgaacagcaggtatttactaactctcaccgctgtattgagagaacagctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgctttgctgaacagcaggtatttactaactctcaccgctgtattgagagaacagctct 560
Query: 361 catctgacttgctcagtcgtaagtacacctgttgcaggtaaaatcctactga 412
||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 catctgacttgctcagttgtaagtacacctgttgcaggtaaaatcctactga 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
