Query= MSMg01no375_e13.b1 MSMg01no375_e13.b1 CHROMAT_FILE:
MSMg01no375_e13.b1 PHD_FILE: MSMg01no375_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:50 2005
(411 letters)
>mm_chr7_143211533_143212343
Length = 811
Score = 659 bits (341), Expect = 0.0
Identities = 388/405 (95%), Gaps = 4/405 (0%)
Strand = Plus / Plus
Query: 6 gaattccaggtgtcc--ctgtcccttgagcagtcatgaagaccaagaggtgtactgaggg 63
|||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 206 gaattcca--tgtgcatctgtcccttgagcagtcatgaagaccaaggggtgtactgaggg 263
Query: 64 aggaccacacatcacagagagcattcctgccaccttatagtgggggccacaggaaaagct 123
|||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 264 aggaccacacatcacagagagcgttcctgccaccttatactgggggccacaggaaaagct 323
Query: 124 gttcatgggagcaggggcctgaaacatgagagatgaccttccaaacacaactgctctggg 183
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 324 gttcatgggagcaggggcatgaaacatgagagatgaccgtccaaacacaactgccctggg 383
Query: 184 cctcactcacccagctttgtcttctttggggggtgtactccagagactccccataccaac 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 384 cctcactcacccagctttgtcttctttggggggtgtattccagagactccccataccaac 443
Query: 244 tggctgtggtagagcggatactgaactgggatggggtaaatccctatgagggtggagatg 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 444 tggctgtggtagagcggatactgaactgggagggggtaaatccctatgagggtggaggtg 503
Query: 304 ggaatggcttaggagtaagctgacctgtctggaaatgggttccagagcctgtcaggataa 363
||| |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 504 ggagtggcttgggagtaagctgacctgtctggaaatgggttccagagcctgtcagtataa 563
Query: 364 gcttatgtcctaaagaccttgcctgatctgattggcagcagcatc 408
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcttatgtcctaaagaccttgcctgatctgattggcagcagcatc 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_e13.g1 MSMg01no375_e13.g1 CHROMAT_FILE:
MSMg01no375_e13.g1 PHD_FILE: MSMg01no375_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:50 2005
(378 letters)
>mm_chr7_143379474_143380251
Length = 778
Score = 716 bits (370), Expect = 0.0
Identities = 376/378 (99%)
Strand = Plus / Minus
Query: 1 tcttacagaggaggagacagatccattgaagacttaggacagcagagcagtcaactctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tcttacagaggaggagacagatccattgaagacttaggacagcagagcagtcaactctgt 519
Query: 61 cacagcagggtcttcccatcaggacaatgccgacttacctgaagaatgaatgccttcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 cacagcagggtcttcccatcaggacaatgccgacttacctgaagaatgaatgccttcttg 459
Query: 121 ctctacattaaaaggagcttatcctgggggcttacccaccactgcatctgccacgggtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 ctctacattaaaaggagcttatcctgggggcttacccaccactgcatctgccacgggtct 399
Query: 181 ttgcttaaagacttacagcaaagcacttacagttcccacccgtggcatttgcagctcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttgcttaaagacttacagcaaagcacttacagttcccacccgtggcatttgcagctcagt 339
Query: 241 gtaatttattgaatatcgtccaaagagcaaacacagggtttatctggtggcgttttagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtaatttattgaatatcgtccaaagagcaaacacagggtttatctggtggcgttttagtt 279
Query: 301 gggtggtaaatgtttgccgtgtaccaagaatagaaaaaaagggtaagattgtgacatgaa 360
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 278 gggtggtaaatgtttgccgtgtaccaagaatagaaagaaagggtaagattgtgacatgaa 219
Query: 361 gagggtggaggagaggga 378
||||||| ||||||||||
Sbjct: 218 gagggtgaaggagaggga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
