Query= MSMg01no375_m04.b1 MSMg01no375_m04.b1 CHROMAT_FILE:
MSMg01no375_m04.b1 PHD_FILE: MSMg01no375_m04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:27 2005
(428 letters)
>mm_chr7_75143766_75144593
Length = 828
Score = 756 bits (391), Expect = 0.0
Identities = 403/407 (99%)
Strand = Plus / Plus
Query: 22 ggcatgctcctgcctggtggcctcccatcgtttttgcttctgctgtcctcattcctaggt 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ggcatgctcctgcctggtggcctcccatcgtttttgcttctgctgtcctcattcctaggt 281
Query: 82 tggaccctgcagcaggggtcctccttcagctcctcctaacactgccctttctccctgttc 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 tggaccctgcagcaggggtcctccttcagctcctcctaacactgccctttctccctgttc 341
Query: 142 caggggatcttcatttccatgtgtttttactattctttgcaggccacctgcgatcttaca 201
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 342 caggggatcttcatttccatgtgtttttactattctttgcaggccacctgggatcttaca 401
Query: 202 tgtttacatctatcttatatcctgaaagcaagtgttggggtctctttggggtgtgccaag 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 tgtttacatctatcttatatcctgaaagcaagtgttggggtctctttggggtgtgccaag 461
Query: 262 tatctgttggctttgaaagggaaagagtgtttcaggcctgactctgccagctgtgagcag 321
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 462 tatctgttggctttgaaagggagagagtgtttcaggcctgactctgccagctgtgagcag 521
Query: 322 agggcgtgtcagcttcacgtgccttccagtgctttctccagtgcgtggattctttgacag 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 agggcgtgtcagcttcacgtgccttccagtgctttctccagtgcgtggattctttgacag 581
Query: 382 gcacgtgtgggacatttgctttcctgtttgcggcttgtgcctttgaa 428
||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gcaggcgtgggacatttgctttcctgtttgcggcttgtgcctttgaa 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_m04.g1 MSMg01no375_m04.g1 CHROMAT_FILE:
MSMg01no375_m04.g1 PHD_FILE: MSMg01no375_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:27 2005
(512 letters)
>mm_chr7_75287874_75288785
Length = 912
Score = 888 bits (459), Expect = 0.0
Identities = 477/483 (98%), Gaps = 2/483 (0%)
Strand = Plus / Minus
Query: 1 taagtagctgagccttgaggtctcaaagtttgtgaccaatacactgtggtggacctgccc 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 taagtggctgagccttgaggtctcaaagtttgtgaccaatacactgtggtggacctgccc 423
Query: 61 cggttccagagtcactggaaatattctcatagcaagcaggaagatctcagggacagcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cggttccagagtcactggaaatattctcatagcaagcaggaagatctcagggacagcaga 363
Query: 121 cgtaggttctaaatgggcatgtcttgctagaaggcacagctgatgtgccttttccagtaa 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cgta-gttctaaatgggcatgtcttgctagaaggcacagctgatgtgccttttccagtaa 304
Query: 181 gcattacaagaagcccatttccatggttgaaaaatgcaaaggattattctgagccatccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gcattacaagaagcccatttccatggttgaaaaatgcaaaggattattctgagccatccc 244
Query: 241 gatgataaagaggacaacaatttgccttt-aaaaaaaaatggaagctgggcgcagtagca 299
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 243 gatgataaagaggacaacaatttgcctttaaaaaaaaaatggaagctgggcacagtagca 184
Query: 300 ctcttctgtagtctcagaacttaagatggctgaggaagaggaggacttgggaagaggagt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ctcttctgtagtctcagaacttaagatggctgaggaagaggaggacttgggaagaggagt 124
Query: 360 tcaaaggctggcaggggaaaacacatcaagaccttgcttcagatccacaacgtaagcaaa 419
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 123 tcaaaggctggcaggggaaaacacatcaagaccttgtttcagatccacaacgtaagcaaa 64
Query: 420 ccagaaggtggcggcaaacctggcggcgacgcttaggacatctaaatactcaattatttc 479
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ccagaaggtggtggcaaacctggcggcgacgcttaggacatctaaatactcaattatttc 4
Query: 480 tac 482
|||
Sbjct: 3 tac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
