Query= MSMg01no377_h03.b1 MSMg01no377_h03.b1 CHROMAT_FILE:
MSMg01no377_h03.b1 PHD_FILE: MSMg01no377_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:37 2005
(290 letters)
>mm_chr7_77283182_77283870
Length = 689
Score = 484 bits (250), Expect = e-141
Identities = 280/290 (96%), Gaps = 1/290 (0%)
Strand = Plus / Plus
Query: 1 ctcagcttctgaggccctgagattattagcatatagggctaaacctggatattttccaat 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagcttctgaagccctgagattattagcatatagggctaaacctggatattttccaat 260
Query: 61 catcagtgataaagtaaagatttggacaacatatttcggagaaaggtcacacaggttcaa 120
|||||| ||||||| ||||||||||||||||||||| ||||||||| |||||||| ||||
Sbjct: 261 catcagagataaagcaaagatttggacaacatattt-ggagaaaggccacacaggctcaa 319
Query: 121 tgagtgaaggtttgctccacctgtcttgccctattctcctgcatctagaggcagatgctg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgagtgaaggtttgctccacctgtcttgccctattctcctgcatctagaggcagatgctt 379
Query: 181 actataaggagaatgctatcatgtattatatacttaggaaaagtagccacataggaccag 240
|||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 380 actagaaggagaatgttatcatgtattatatacttaggaaaagtagccacatacgaccag 439
Query: 241 agaactatcaggcttacttatgtgaaaagtccggactggtcaggtctgag 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 agaactatcaggcttacttatgtgaaaagtccggactggtcaggtctgag 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no377_h03.g1 MSMg01no377_h03.g1 CHROMAT_FILE:
MSMg01no377_h03.g1 PHD_FILE: MSMg01no377_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:37 2005
(202 letters)
>mm_chr7_77485310_77485911
Length = 602
Score = 379 bits (196), Expect = e-110
Identities = 199/200 (99%)
Strand = Plus / Minus
Query: 1 tccctgggggctagtagagacggaagacaagagctgtttttagggaagaagtaacgcctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tccctgggggctagtagagacggaagacaagagctgtttttagggaagaagtaacgcctg 341
Query: 61 caggtcgataccaggggagagcatttcctagctgccaggtgattttctgtgagacacgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 caggtcgataccaggggagagcatttcctagctgccaggtgattttctgtgagacacgta 281
Query: 121 ggaggaaaaaaccagcaacgaacagcctttataggaggatggatggatggggtccggggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 ggaggaaaaaaccagcaacgaacagcctttataggaggatggatggatggggtccggggg 221
Query: 181 cagattttatttttcttgaa 200
|||||||||||||| |||||
Sbjct: 220 cagattttattttttttgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 202
Length of database: 602
Length adjustment: 8
Effective length of query: 194
Effective length of database: 594
Effective search space: 115236
Effective search space used: 115236
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
