Query= MSMg01no378_m02.b1 MSMg01no378_m02.b1 CHROMAT_FILE:
MSMg01no378_m02.b1 PHD_FILE: MSMg01no378_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:19 2005
(347 letters)
>mm_chr7_25288422_25289169
Length = 748
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%), Gaps = 1/344 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcatttgtccctactcccccaccgccagctgcaaggagccagcaaagacattg 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcatttgaccctactcccccaccgccagctgcaaggagccagcaaagacattg 264
Query: 65 accagagtccgggatgggatggtggtcttctcccccactagctaacacctcggcgcttgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accagagtccgggatgggatggtggtcttctcccccactagctaacacctcggcgcttgg 324
Query: 125 gcaggggttgggggtgttggatgcctggatctctcccagggccaaaggctagggtccaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcaggggttgggggtgttggatgcctggatctctcccagggccaaaggctagggtccaga 384
Query: 185 gacttgggatcccctatggagacagggacttaaggaccctcctagacccccagtcctggg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacttgggatcccctatggagacagggacttaaggaccctcctagacccccagtcctggg 444
Query: 245 acgggtaataaggatttgggttgggg-aagaaaacaggttgaaggccagaacctctaggc 303
|||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||||
Sbjct: 445 acgggtaataaggatttgggttgggggaagaaaacagggggaaggccagaacccctaggc 504
Query: 304 tacagaaccaggtcttgtgggggagggggccagattctgggaag 347
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tacagaaccaggtcttgtgggggagggggccagattctgggaag 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 347
Length of database: 748
Length adjustment: 9
Effective length of query: 338
Effective length of database: 739
Effective search space: 249782
Effective search space used: 249782
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no378_m02.g1 MSMg01no378_m02.g1 CHROMAT_FILE:
MSMg01no378_m02.g1 PHD_FILE: MSMg01no378_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:19 2005
(250 letters)
>mm_chr7_25453087_25453735
Length = 649
Score = 451 bits (233), Expect = e-131
Identities = 245/249 (98%), Gaps = 1/249 (0%)
Strand = Plus / Minus
Query: 1 tctggaggtaaagatccctcaggtttctggtgctcggggctctataggtgagggaagact 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 448 tctggaggtaaagatccctcaggtttctggtgctcggggctctagaggtgagggaagacg 389
Query: 61 gggctccccgttccctaagcctccccctgttgccccatcttttctggctcctaggaggca 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gggctccccgttccctaagcc-ccccctgttgccccatcttttctggctcctaggaggca 330
Query: 121 tggactccaccgtgcaagttaaaggctgcaccactacgatcggctgcagactgatggcca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tggacgccaccgtgcaagttaaaggctgcaccactacgatcggctgcagactgatggcca 270
Query: 181 tgatagactcagtgggacccatgacagtgaaggagacctgtagttaccagtcattccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgatagactcagtgggacccatgacagtgaaggagacctgtagttaccagtcattccttc 210
Query: 241 agccccgga 249
|||||||||
Sbjct: 209 agccccgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 649
Length adjustment: 9
Effective length of query: 241
Effective length of database: 640
Effective search space: 154240
Effective search space used: 154240
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
