Query= MSMg01no380_i11.b1 MSMg01no380_i11.b1 CHROMAT_FILE:
MSMg01no380_i11.b1 PHD_FILE: MSMg01no380_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:38 2005
(245 letters)
>mm_chr7_146370215_146370859
Length = 645
Score = 453 bits (234), Expect = e-132
Identities = 240/242 (99%), Gaps = 1/242 (0%)
Strand = Plus / Plus
Query: 1 ggccagggagatgagtcagcaggtaaaggcactgactgccaagcctgcacagcctgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 202 ggccagggagatgagtcagcaggtaaaggcactgactgccaagcctg-acagcctgagtt 260
Query: 61 taatccctggaagtcacatgtcagaaaggaaccgacactctcaagttgttttcagacttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taatccctggaagtcacatgtcagaaaggaaccgacactctcaagttgttttcagacttc 320
Query: 121 cacatgtgtgccacaatctgacagccccaagtctgctgtctctcactctccatttctatc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 cacatgtgtgccacaatctgacagccccaagtctgctgtctctcactctccatttccatc 380
Query: 181 caagtgagccagtcctggacacctgttgtgacatagctatgacattcctcgaaattcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caagtgagccagtcctggacacctgttgtgacatagctatgacattcctcgaaattcatc 440
Query: 241 ct 242
||
Sbjct: 441 ct 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no380_i11.g1 MSMg01no380_i11.g1 CHROMAT_FILE:
MSMg01no380_i11.g1 PHD_FILE: MSMg01no380_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:21:38 2005
(432 letters)
>mm_chr7_146569472_146570303
Length = 832
Score = 752 bits (389), Expect = 0.0
Identities = 422/433 (97%), Gaps = 2/433 (0%)
Strand = Plus / Minus
Query: 1 agattcagagctagcaacaggttgaagggtttcaacccatattccttgtgagtattctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agattcagagctagcaacaggttgaagggtttcaacccatattccttgtgagtattctgg 527
Query: 61 gtcccattcggaagttacccttagcatatggcacttcacggtcctagggtacattccact 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gtcccattcagaagttacccttagcatatggcacttcacggtcctagggtacattccact 467
Query: 121 cttttcatagccaggtttcaacatccctgccgctgcataccacaacactaaggttaagtg 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 466 cttttcatagccaggtttcaacatccgtgccgctgcataccacaacactaaggttaagtg 407
Query: 181 acttattggataattttctgcagacagaatctaactggatgcagagt-aaaagaatccaa 239
||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 406 acttattagataattttctgcagacagaatctaactggatgcagagtggaaagaatccaa 347
Query: 240 gctccaatctctcttttggtagggaaaacggggtggagagacccttaagcggggaaatgt 299
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 346 gctccaatc-ctcttttggtagggaaaacggggtggagagacccttaagctaggaaatgt 288
Query: 300 ttttgattgagggggccgtatctatgtctatgtctgtatgtctgcgcctctgtgtgtata 359
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 287 ttttgattgagggggccgtatctatgtctatgtctgtatgtctgtgtctctgtgtgtata 228
Query: 360 tgtgtgtgcctgtacccaacctgtgtgacctgtgagagtcagttctctccttccaatatg 419
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgtgtgtgcatgtacccaacctgtgtgacctgtgagagtcagttctctccttccaatatg 168
Query: 420 gagatcctggaca 432
|||||||||||||
Sbjct: 167 gagatcctggaca 155
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
