Query= MSMg01no383_m10.b1 MSMg01no383_m10.b1 CHROMAT_FILE:
MSMg01no383_m10.b1 PHD_FILE: MSMg01no383_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:54 2005
(515 letters)
>mm_chr7_84430677_84431592
Length = 916
Score = 919 bits (475), Expect = 0.0
Identities = 502/511 (98%), Gaps = 1/511 (0%)
Strand = Plus / Minus
Query: 6 aattcaaaatgaatacctatgcatgtcactatcttatttcagtccaatacttaaaaacat 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aattcaaaatgaaaacctatgcatgtcactatcttatttcagtccaatacttaaaaacat 657
Query: 66 ctttatgctcacaaactggtcatgcaagttttatgtctggaaagccaatctgaattttgt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ctttatgctcacaaactggtcatgcaagttttatgtctggaaagccaatctgaattttgt 597
Query: 126 ccttctctgcctcctctagtctcttttatcctggagcctttgtacatattagtgtaaagt 185
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ccttctttgcctcctctagtctcttttatcctggagcctttgtacatattagtgtaaagt 537
Query: 186 cctacccacatgcaactgatgaatgtctaggctttcattagattatacattagacataat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 cctacccacatgcaactgatgaatgtctaggctttcattagattatacattagacataat 477
Query: 246 ctatttccaggactgggtaatctcgcagtttatttttaacaagtttcatattgctcacag 305
|||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 476 ctatttccaggactgggtaatctctcagtttaattttaacaagtttcatattgctcacag 417
Query: 306 gg-tttttcacagacctagttctacttggatgattaataacccccatacaatgttgtagt 364
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ggttttttcacagacctagttctacttggatgattaataacccccatacaatgttgtagt 357
Query: 365 tcccacaaggaaggccagattcccatcagaactccagcagtgtcatggataaactggctg 424
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||
Sbjct: 356 tcccacaaggaaggccagattcccatcagacctccagcggtgtcatggataaacttgctg 297
Query: 425 tagactaacttgctcaatgataggattaactgtataaatatctgaagctaaatgggtctt 484
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 296 tagactaacttgctcaatgataggattaactgtgtaaatatctgaagctaaatgggtctt 237
Query: 485 tgtttacatcataactctcctactttacagt 515
|||||||||||||||||||||||||||||||
Sbjct: 236 tgtttacatcataactctcctactttacagt 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 916
Length adjustment: 10
Effective length of query: 505
Effective length of database: 906
Effective search space: 457530
Effective search space used: 457530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_m10.g1 MSMg01no383_m10.g1 CHROMAT_FILE:
MSMg01no383_m10.g1 PHD_FILE: MSMg01no383_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:54 2005
(491 letters)
>mm_chr7_84244815_84245705
Length = 891
Score = 942 bits (487), Expect = 0.0
Identities = 490/491 (99%)
Strand = Plus / Plus
Query: 1 ttttagtctgcaacaatagcaacactaaatccttttatctgaaacctgagagcctgagtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttagtctgcaacaatagcaacactaaatccttttatctgaaacctgagagcctgagtg 260
Query: 61 gaaacagagaatttggaagacagttcccaacataacaaaatagtctttaaatagctctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaacagagaatttggaagacagttcccaacataacaaaatagtctttaaatagctctac 320
Query: 121 tgatttttttttctttcttttctatttccatgtaggttctcaaacatctagcccatcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgatttttttttctttcttttctatttccatgtaggttctcaaacatctagcccatcttg 380
Query: 181 cagattttggacttctatccatctttgctttctctaccataactgtaaacagcttgatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagattttggacttctatccatctttgctttctctaccataactgtaaacagcttgatac 440
Query: 241 aatttgagctatactgtttgtagctgtgaaggaagaagcagaatagaatacaaaataaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatttgagctatactgtttgtagctgtgaaggaagaagcagaatagaatacaaaataaaa 500
Query: 301 tagactgtgtagtaaaacagaacacaaatatgtgcccatggcaagggaaacagactcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagactgtgtagtaaaacagaacacaaatatgtgcccatggcaagggaaacagactcctg 560
Query: 361 tgaaattgccaattaacttagttgtagtaaatgatcttgtaaagaaatgtccctgactag 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaattgccaattaacttagttgcagtaaatgatcttgtaaagaaatgtccctgactag 620
Query: 421 tgcttgttactgttgcagtttcaaaaaattaagaaatgaattctctaaagaattccccca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcttgttactgttgcagtttcaaaaaattaagaaatgaattctctaaagaattccccca 680
Query: 481 ccacttttaat 491
|||||||||||
Sbjct: 681 ccacttttaat 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
