Query= MSMg01no383_o13.b1 MSMg01no383_o13.b1 CHROMAT_FILE:
MSMg01no383_o13.b1 PHD_FILE: MSMg01no383_o13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:04 2005
(428 letters)
>mm_chr7_3913811_3914639
Length = 829
Score = 783 bits (405), Expect = 0.0
Identities = 420/425 (98%), Gaps = 1/425 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaggtcttgcattccagcactgattgattgtgtttccagaaatgatataaatg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaggtcttggattccagcactgattgattgtgtttccagaaatgatataaatg 264
Query: 65 agatctcagggaggcattttgctgggtttggacagttgcatgtggaatcccaaggcccac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatctcagggaggcattttgctgggtttggacagttgcatgtggaatcccaaggcccac 324
Query: 125 ttggaatcaatttcccaggacgataactgtcagaactcatggaaattctgtgtttgctag 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttggaatcaatttcccagtacgataactgtcagaactcatggaaattctgtgtttgctag 384
Query: 185 attccagttcataggactataaaatgctgctccgtcatccacacactgatgaaatcatga 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 attccagttcataggactataaaatgctgctccatcatccacacactgatgaaatcatga 444
Query: 245 ag-aactggaaaagatatctttccatgtgcaagggatggaaggttatgggagggtgacag 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aggaactggaaaagatatctttccatgtgcaagggatggaaggttatgggagggtgacag 504
Query: 304 aagcttctcttcctcttggacaggccttgttaaatgttctagggaaagtggagcttatct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagcttctcttcctcttggacaggccttgttaaatgttctagggaaagtggagcttatct 564
Query: 364 tgataagccgagtagtcaggtcataaaattgagtcatgtaactttatccaagctacaaga 423
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgataagccaagtagtcaggtcataaaattgagtcatgtaactttatccaagctacaaga 624
Query: 424 ccagc 428
|||||
Sbjct: 625 ccagc 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 829
Length adjustment: 9
Effective length of query: 419
Effective length of database: 820
Effective search space: 343580
Effective search space used: 343580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_o13.g1 MSMg01no383_o13.g1 CHROMAT_FILE:
MSMg01no383_o13.g1 PHD_FILE: MSMg01no383_o13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:04 2005
(523 letters)
>mm_chr7_4115253_4116177
Length = 925
Score = 967 bits (500), Expect = 0.0
Identities = 519/526 (98%), Gaps = 4/526 (0%)
Strand = Plus / Minus
Query: 1 ctggacccctggaatgtgagagaggaaagcagggaaactcccagcccgtgaaaccagaga 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 725 ctggacccctggaatgtgagagaggaaagcaggggaactcccagcccgtgaaaccagaga 666
Query: 61 gctaggaggtggggctgctgagacccaagggtgcaggacccagcctgaggcggtggcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gctaggaggtggggctgctgagacccaagggtgcaggacccagcctgaggcggtggcact 606
Query: 121 cagaccgccgcatgcctaggtcctggagcccctaccaggtaggacgtgacacttacttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 cagaccgccgcatgcctaggtcctggagcccctaccaggtaggacgtgacacttacttta 546
Query: 181 tttgccaggtgaga--tctcctgcagaaagaaggaaaaaggcgccagagaggccaggagg 238
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tttgccaggtgagatctctcctgcagaaagaaggaaaaaggcgccagagaggccaggagg 486
Query: 239 gaccccagtttatgtcggatctcaattaagtctggaccacgaggtgagaaggttgtagtg 298
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gaccccagcttaagtcggatctcaattaagtctggaccacgaggtgagaaggttgtagtg 426
Query: 299 ggcaggggtcttcaaccgggggcgtgggaggaagacagactagttagcaaacagaccagg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ggcaggggtcttcaaccgggggcgtgggaggaagacagactagttagcaaacagaccagg 366
Query: 359 gacttcgacgtacccgatgcagcccggtggctttaggaaaagaattgccaatgctgagat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gacttcgacgtacccgatgcagcccggtggctttaggaaaagaattgccaatgctgagat 306
Query: 419 cccaggggtctccaggtggggtcccttgccaggtctgggctccaccctcctccagcctga 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 cccaggggtctccaggtggggtcccttgccaggtctgggctccaccctcctccagcctga 246
Query: 479 gaaccagtccagccagctctggagcgtggt-attattttcttgctg 523
|||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 245 gaaccagtccagccagctctggagcg-ggttattattttcttgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 925
Length adjustment: 10
Effective length of query: 513
Effective length of database: 915
Effective search space: 469395
Effective search space used: 469395
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
