Query= MSMg01no384_a05.b1 MSMg01no384_a05.b1 CHROMAT_FILE:
MSMg01no384_a05.b1 PHD_FILE: MSMg01no384_a05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:12 2005
(579 letters)
>mm_chr7_109470274_109471252
Length = 979
Score = 1089 bits (563), Expect = 0.0
Identities = 572/575 (99%)
Strand = Plus / Plus
Query: 5 gaattcacaaaatctgtctgcctctactgcccgagtgctggaattaaaggcagaaccacc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaaaatctgtctgcctctactgcccgagtgctggaattaaaggcagaaccacc 264
Query: 65 atgcctagctctgaattaatttttaaaaatagtgttgagtcatgtatatctttaaaccct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcctagctctgaattaatttttaaaaatagtgttgagtcatgtatatctttaaaccct 324
Query: 125 tgaaagtttgctcgtggagtttctgcagtcaataatgacatgaggtttaagatgccgaca 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgaaagtttgctcctggagtttctgcagtcaataatgacatgaggtttaagatgccgaca 384
Query: 185 gatatcaaagggtgcttggttgctgttggcttctgtgcagctctctaccatcatttgcat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatatcaaagggtgcttggttgctgttggcttctgtgcagctctctaccatcatttgcat 444
Query: 245 ctcagcagacattagatctgcttccttagatcttacccactgatgtgtatttgatgatgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctcagcagacattagatctgcttccttagatcttacccactgatgtgtatttgatgatgt 504
Query: 305 ttgggctactgtgagaataaggtcgctgattgcaaactgccaatcagtggagtggtgaca 364
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttggactactgtgagaataaggtcgctgattgcaaactgccaatcagtggagtggtgaca 564
Query: 365 cacctttcatatatgtagtgggaggctgtcataggcttgacagtatcttagcctgtgaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacctttcatatatgtagtgggaggctgtcataggcttgacagtatcttagcctgtgaag 624
Query: 425 taaaggaacagggcgaggcctggttgaaacaagagctgcaagctgcaagggcggtgaggt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taaaggaacagggcgaggcctggttgaaacaagagctgcaagctgcaagggcggtgaggt 684
Query: 485 agcaaatgtgtgttaagctagccagtcccagctctgtatatagcttgttgagaactatgc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agcaaatgtgtgttaagctagccagtcccagctctgtatatagcttgttgagaactatgc 744
Query: 545 aaaacagtaataagtagtggaaacgtacaatttgc 579
||| |||||||||||||||||||||||||||||||
Sbjct: 745 aaagcagtaataagtagtggaaacgtacaatttgc 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_a05.g1 MSMg01no384_a05.g1 CHROMAT_FILE:
MSMg01no384_a05.g1 PHD_FILE: MSMg01no384_a05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:12 2005
(438 letters)
>mm_chr7_109627631_109628469
Length = 839
Score = 710 bits (367), Expect = 0.0
Identities = 422/443 (95%), Gaps = 8/443 (1%)
Strand = Plus / Minus
Query: 1 tctctg-tgtgagggtttgttaaaaggcatgcctcttctggtatccagagggagtgtggt 59
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tctctgctgtgagggtttgttaaaaggcatgcctcttctggtatccagagggagtgtggt 406
Query: 60 catgcccaggcaagccctggctgagagggaggagagcatccctggattgctccacagttc 119
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 405 catgcccaggcaagccctggctgagagggaggagagcatccctgaattgctccacagttc 346
Query: 120 ccgaggcttctctgatcttcagggtcgatagcatttctgcagtgaggtggctagttgctg 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 345 ccgaggcttctctgatcttcagggttgatagcatttctgcagtgaggtggctagttgctg 286
Query: 180 aggatgcctggccatagctcagattctaaaacccagcaagaaccaggcaaaccacaacaa 239
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 285 aggatgcctggccatagctcagattctaaaacccagcaagacccaggcaaaccacaacaa 226
Query: 240 ggtgtttaccctaaactcgtgagaaaagagcactctgtagtgactacccagatgcaaacc 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 225 ggtgcaaaccctaaactcgtgagaaaagagcactctgtagtgactacccagatgcgagcc 166
Query: 300 tggctcagttatttatgagctgtgtgacttcgaactagactttaccccctccatgtcttg 359
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 165 cagctcagttatttatgagctgtgtgactttgaactagactttagcccctccatgtcttg 106
Query: 360 gtttccttcttagtaaaatc-ctttttttttttaatttcattttatttttagacagggcc 418
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 105 gtttccttcttagtaaaattacttttttttt---atttcattttatttttagacagggcc 49
Query: 419 tcat---gtagccttggctgacc 438
|||| ||||||||||||||||
Sbjct: 48 tcattatgtagccttggctgacc 26
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 839
Length adjustment: 9
Effective length of query: 429
Effective length of database: 830
Effective search space: 356070
Effective search space used: 356070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
