Query= MSMg01no384_f08.b1 MSMg01no384_f08.b1 CHROMAT_FILE:
MSMg01no384_f08.b1 PHD_FILE: MSMg01no384_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:36 2005
(504 letters)
>mm_chr7_89515868_89516771
Length = 904
Score = 946 bits (489), Expect = 0.0
Identities = 498/501 (99%)
Strand = Plus / Plus
Query: 4 ggaattccagtcaggacttacatactgttcttcctcagtccagcatgccttccagggcct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccagtcaggacttacatactgttcttcctcagtccagcatgccttccagggcct 263
Query: 64 atcgagcgttcccctccagcatgggtttcttccaagacctatagggtggtctcctgacac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcgagcgttcccctccagcatgggtttcttccaagacctatagggtggtctcctgacac 323
Query: 124 atactatccctcccaggacctatagagtggtctctttaaatagaattcttgcaggtcttg 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 324 atactatccctcccaggacctatagagtggtctctttaaacagaattcttgcaggtcttg 383
Query: 184 tagagtagtcgctctatacatatcacctgctggggcctatagagtggtttccttcagcct 243
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tagagtagttgctctatacatatcacctgctggggcctatagagtggtttccttcagcct 443
Query: 244 gcacagggaatttctgctcagatccatatagttttacctcagcacagaattcttgtctct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcacagggaatttctgctcagatccatatagttttacctcagcacagaattcttgtctct 503
Query: 304 tgtcaggatgctgtagagattctagggctagaacaaaaaagtccccccaacttctgcata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtcaggatgctgtagagattctagggctagaacaaaaaagtccccccaacttctgcata 563
Query: 364 gcacccttctcaagtagttttctcctaccaacccacatccttcctataaaatagcattcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcacccttctcaagtagttttctcctaccaacccacatccttcctataaaatagcattcc 623
Query: 424 cttctccactgacttccttggcagggcctgttggcctaactcaggtgactagagcaggaa 483
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 624 cttctccactgacttccttggcagggtctgttggcctaactcaggtgactagagcaggaa 683
Query: 484 gggggagaatagagagaagaa 504
|||||||||||||||||||||
Sbjct: 684 gggggagaatagagagaagaa 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_f08.g1 MSMg01no384_f08.g1 CHROMAT_FILE:
MSMg01no384_f08.g1 PHD_FILE: MSMg01no384_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:36 2005
(458 letters)
>mm_chr7_89688099_89688959
Length = 861
Score = 804 bits (416), Expect = 0.0
Identities = 450/462 (97%), Gaps = 5/462 (1%)
Strand = Plus / Minus
Query: 1 tatggttctgagaactgttatttatgtagttaccatgttttgagatcttacaaccaacaa 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tatggttctgagaactgttttttatgtagttaccatgttttgagatcttacaaccaacaa 602
Query: 61 agagactttttcattaaagacaggcttcttttgcctctacacaaaaagtttcatgctaag 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 601 agagactttttcattaaagacaggcttcttttgcctctacacaaaaagttccatgctaag 542
Query: 121 accagtgtgacacattccagaatttcttaagatacaataattaa-caatcatttaaagat 179
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 541 accagtgtgacacattccagaatttcttaagatacaataaataaacaatcatttaaagat 482
Query: 180 aactatgtgatttttatttaccagatggatatttttgccaatctttattttgccaatctt 239
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 481 aactatgtgatttttatttaccagatggatatttttgccaatctttattcagccaatctt 422
Query: 240 ggtgggctttttgtttgtaactggg-agagtgttgaacattctctagctttaacagctaa 298
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 421 ggtgggctttttgtttgtaa-tggggagagtgttgaacattctctagctttaacagctaa 363
Query: 299 actgcaggataaggcagat--gtttgcagaggatgaagctgtaatgttctttctgtttaa 356
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actgcaggataaggcagatatgtttgcagaggatgaagctgtaatgttctttctgtttaa 303
Query: 357 caaactcctgggcttttgaatgttctcaatcataggtaggaatgcatcttggagtaaaac 416
||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 302 caaactcctgggcgtttgaatgttctcaatcataggtaggagtgcatcttggagtaaaac 243
Query: 417 atttattccttatcttgaattattgcccaagtcataaaggtt 458
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atttattccttatcttgaattattgcccaagtcataaaggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 861
Length adjustment: 10
Effective length of query: 448
Effective length of database: 851
Effective search space: 381248
Effective search space used: 381248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
