Query= MSMg01no386_o06.b1 MSMg01no386_o06.b1 CHROMAT_FILE:
MSMg01no386_o06.b1 PHD_FILE: MSMg01no386_o06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:47 2005
(587 letters)
>mm_chr7_132263086_132264072
Length = 987
Score = 959 bits (496), Expect = 0.0
Identities = 571/608 (93%), Gaps = 21/608 (3%)
Strand = Plus / Minus
Query: 1 caggcatacatcatcccacttccattagcccgcttcacattcacttactgggttgcattg 60
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 659 caggcatacatcatcccacttccattagcctgcttcacgttcacttactgggttgcattg 600
Query: 61 atacctactgtatactctatctcacatcctcttgaatgattcctgaaggaccatcaggct 120
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 599 atacctactgtatactctatcttacatcctcctgaatgattcctgaaggaccatcaggct 540
Query: 121 tgtctcagcctctgctgttcccacaacaggcagatgccacagcctctagttgctctttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgtctcagcctctgctgttcccacaacaggcagatgccacagcctctagttgctctttcc 480
Query: 181 taaatcaacaacaactctgaaacttgctttgcattgatgcacatgaaggagggaagttga 240
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 479 tatatcaacaacaactctgaaacttgctctgcattgatgcacatgaaggagggaagttga 420
Query: 241 agaataaggaagccaattttgggagataatgtgccactgtccagaagatcaacttgggcc 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 419 agaataaggaagccaattttgggagataatgtaccactgtccagaagatcaacttgggcc 360
Query: 301 tggcttggatactgctgtgggaaactaactttcttgtgcaaggtacgcctactgagcttt 360
||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||
Sbjct: 359 tggcttggacactgctgtgagaaactaactttcttgtgcaaggtaggcctactgagcttt 300
Query: 361 ggaaggtttgaagggtctgcagaggtggagggtggacaaaggagggaggaggaaggtctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ggaaggtttgaagggtctgcagaggtggagggtggacaaaggagggaggaggaaggtctc 240
Query: 421 cagccttctgagaatactttctcgagtatttggaaatg-------gcct----------- 462
|||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 239 cagccttctgagaatactttctcgagtatttggaaatgggaaactgccttctttcctggc 180
Query: 463 --ccagaaaagttatcatcaatctcttccccaggcctgttttcagaatcacttctgtccg 520
||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||
Sbjct: 179 ccccagaaaagttatcatcaatcccttccccaggcctgtttgcagaatcgcttctgtccg 120
Query: 521 atgctgggtg-ccctcctgctctcattccttaaaaagaagttcatcctggagctttccct 579
|||||||||| |||||||| ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 119 atgctgggtgcccctcctgttctcagtccttagaaagaagttcatcctggagctttccct 60
Query: 580 ctgctggg 587
||||||||
Sbjct: 59 ctgctggg 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_o06.g1 MSMg01no386_o06.g1 CHROMAT_FILE:
MSMg01no386_o06.g1 PHD_FILE: MSMg01no386_o06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:47 2005
(494 letters)
>mm_chr7_132102224_132103117
Length = 894
Score = 862 bits (446), Expect = 0.0
Identities = 482/494 (97%)
Strand = Plus / Plus
Query: 1 attcactggatctgaaccccagaatctgtgtggtgctgagccaaagcagaggtggtttgg 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 201 attcactggatctgaaccccagaatctgtgtggtgctgagccaatgcagaggtggttcgg 260
Query: 61 aggttaagtctgtgcagacaggaagaggctctggtaaagaggtgatgtattatgctccac 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 aggttaagtctgtgcagacaggaagaggctctggtaaagaggtgatgttttatgctccac 320
Query: 121 ccctcactagcaaacgagtgaccctagaggcagaaatttgacccacagacacgtttgatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctcactagcaaacgagtgaccctagaggcagaaatttgacccacagacacgtttgatt 380
Query: 181 tggcctgttaatatttaaaattattttctttgactgtcaatttaaaagcacgattttacc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 tggcctgttaatatttaaaattattttctttgactgtcaatttaaaagcaagattttacc 440
Query: 241 cgcctgtctttctttactcatttaacaatatcttgcatttagcaatagtctgcccacatc 300
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 cgcctgtctttcaaaactcatttaacaatatcttgcgtttagcaatagtctgcccacatt 500
Query: 301 tctccatgcttcctgagtggtgctgtggggagatgtccctttagatccatcgcctattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctccatgcttcctgagtggtgctgtggggagatgtccctttagatccatcgcctattct 560
Query: 361 gtccggtctaccaccaccccctctccgccaactccccaatcctcatcccattcctagtcc 420
||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtctggtctaccaccaccccctccccgccaactccccaatcctcatcccattcctagtcc 620
Query: 421 attcaacacatggggtcaccttgggattcggatcaggtgagtggtgtgcgccgtttggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 621 attcaacacatggggtcaccttgggattcggatcaggtgagtggtgtgcgcggtttggca 680
Query: 481 cagatgctgtaggt 494
||||||||||||||
Sbjct: 681 cagatgctgtaggt 694
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space: 427856
Effective search space used: 427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
