Query= MSMg01no388_k05.b1 MSMg01no388_k05.b1 CHROMAT_FILE:
MSMg01no388_k05.b1 PHD_FILE: MSMg01no388_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:01 2005
(417 letters)
>mm_chr7_125118859_125119675
Length = 817
Score = 797 bits (412), Expect = 0.0
Identities = 415/416 (99%)
Strand = Plus / Plus
Query: 2 ggttgaggaggtggctccattgaccaagtgctcactttgtatggacctgagttcagagat 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggttgaggaggtggctccattgaccaagtgctcactttgtatggacctgagttcagagat 261
Query: 62 ccagggcctacattgcacatctgtaaccccaggggaatgtatcaccaggaaaatggaccc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccagggcctacattgcacatctgtaaccccaggggaatgtatcaccaggaaaatggaccc 321
Query: 122 aggcagatccccggatttgccagtctagctgaattcgtgaattccagattagtgagtgac 181
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggcagatccccagatttgccagtctagctgaattcgtgaattccagattagtgagtgac 381
Query: 182 tcttcctcaaaaaataaagtgaggagtggttgaggaagacacctaagattgacctctgac 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcttcctcaaaaaataaagtgaggagtggttgaggaagacacctaagattgacctctgac 441
Query: 242 ccctatacataaatatagacatacacatgcactcacacatagtaataatgacagttgaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccctatacataaatatagacatacacatgcactcacacatagtaataatgacagttgaaa 501
Query: 302 aatcttgcaaatacgtcaaggacttatacaactttaatcatgacttatttacttacattg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aatcttgcaaatacgtcaaggacttatacaactttaatcatgacttatttacttacattg 561
Query: 362 ccactaaaaatacaaagccatgtgctataatcagacttgctttaaaggtggaatcc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ccactaaaaatacaaagccatgtgctataatcagacttgctttaaaggtggaatcc 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_k05.g1 MSMg01no388_k05.g1 CHROMAT_FILE:
MSMg01no388_k05.g1 PHD_FILE: MSMg01no388_k05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:01 2005
(442 letters)
>mm_chr7_125322764_125323605
Length = 842
Score = 787 bits (407), Expect = 0.0
Identities = 433/447 (96%), Gaps = 10/447 (2%)
Strand = Plus / Minus
Query: 1 ttcagtatgtcgactttgcctgaattcatgagatctttttacctcagcctcctgagtgct 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 509 ttcagtatgtcgactttgcctgaattcatgagatccttttacctcagcctcctgagtgct 450
Query: 61 gagctccacggtacctggtggtttggtttcttataggaggtgctagattagtgggttgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gagctccacggtacctggtggtttggtttcttataggaggtgctagattagtgggttgac 390
Query: 121 ttgttaaagagtattcatctctgaacttgaattttaagtctataataattacagattact 180
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 389 ttgttaaagagtattcatctctgaacttgaatttcaagtctgtaataattacagattact 330
Query: 181 tgttttagaattattttagtttttctggtataaatgaatttgctacacttacttagttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tgttttagaattattttagtttttctggtataaatgaatttgctacacttacttagttaa 270
Query: 241 ggatatttttt-----taagtttgagatttaggagcttgctcagtcactaaaatgcttgt 295
||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggata-----tacaaataagtttgagatttaggagcttgctcagtcactaaaatgcttgt 215
Query: 296 cacacaagcatgaagagctgagtataggatctgtgtcaaaaagctttgcatgattggata 355
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 214 cacacaagcatgaagagctgagtataggatctgtgtcaaaaagctttgtatgattggata 155
Query: 356 tgcttgtaaccccagtgaaaggcaggtagagtagagtggccaatgagatactgtctcaaa 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 tgcttgtaaccccagtgaaaggcaggtagagtagagtggccaatgagatactgtctcaaa 95
Query: 416 acaaacaaagatggataataatactca 442
|||||||||||||||||||||||||||
Sbjct: 94 acaaacaaagatggataataatactca 68
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
