Query= MSMg01no389_m18.b1 MSMg01no389_m18.b1 CHROMAT_FILE:
MSMg01no389_m18.b1 PHD_FILE: MSMg01no389_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:31 2005
(292 letters)
>mm_chr7_65109429_65110123
Length = 695
Score = 491 bits (254), Expect = e-143
Identities = 284/298 (95%), Gaps = 9/298 (3%)
Strand = Plus / Minus
Query: 1 gttttgtaatgtttgatgtttacttaccctcatttgcctagcaactgttctagagcaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gttttgtaatgtttgatgtttacttaccctcatttgcctagcaactgttctagagcaatc 436
Query: 61 tgttattttctgtgacctcatggatgtattttagtgtgtaggataagtatcttaagcagt 120
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgttattttctgtgacctcgtgaatgtattttagtgtgtaggataagtatcttaagcagt 376
Query: 121 tttaacttagagatcattgatattattcttcactgtttagcacaaatattttagttctct 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tttaacttagaggtcattgatattattcttcactgtttagcacaaatattttagttctct 316
Query: 181 ttcaattataaatattatattcaattaagaataaaacattgaataatgtaatttgtattg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttcaattataaacattatattcaattaagaataaaacattgaataatgtaatttgtattg 256
Query: 241 gcagttgtctttcttttt------ttatgatatactactctatgtcctgactgtacag 292
|||||||| | || ||| ||||||||||||||||||||||||||||||||||
Sbjct: 255 gcagttgt-tgtc--tttcagagcttatgatatactactctatgtcctgactgtacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 695
Length adjustment: 9
Effective length of query: 283
Effective length of database: 686
Effective search space: 194138
Effective search space used: 194138
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no389_m18.g1 MSMg01no389_m18.g1 CHROMAT_FILE:
MSMg01no389_m18.g1 PHD_FILE: MSMg01no389_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:31 2005
(456 letters)
>mm_chr7_64938631_64939486
Length = 856
Score = 812 bits (420), Expect = 0.0
Identities = 447/456 (98%)
Strand = Plus / Plus
Query: 1 tccttggtgttatcaggccctggtacttaatcacagaacaaagatggggtgctattatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 tccttggtgttatcaggccctggtacttaatcacagaacaaagatggggtgttattatat 260
Query: 61 aaacattatgcatctgttgtgtcagaagacacgtcactcagcaaagtgacatgaactagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaacattatgcatctgttgtgtcagaagacacgtcactcagcaaagtgacatgaactagc 320
Query: 121 tagagacttagttctgcaatagaataccactgcgtcagtctataaatgaagcatagggtc 180
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagacttaggtctgcaatagaataccactgcgtcagtctataaatgaagcatagggtg 380
Query: 181 cagggaggatctggtcccattgtgcaattacaaagggaagactagtgatgaagtatcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggaggatctggtcccattgtgcaattacaaagggaagactagtgatgaagtatcatg 440
Query: 241 acaccatatgtttatattctcctcaaaaagacatctaaaaggccatattcatacttgtat 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaccatatgccaatattctcctcaaaaagacatctaaaaggccatattcatacttgtat 500
Query: 301 gcacatagagattcatttcacggaactagctggagcactagaggatggcaagtctgatgt 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcacatagagattcatttcagggaactagctggagcactagaggatggcaagtctgatgt 560
Query: 361 ctacaggcaaggccatggggctggatacccaaggaagaactgatgcttcaattcaagtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctacaggcaaggccatggggctggatacccaaggaagaactgatgcttcaattcaagtac 620
Query: 421 acgcccaccagatgtctttctctttgtaaggcttca 456
| | ||||||||||||||||||||||||||||||||
Sbjct: 621 aagaccaccagatgtctttctctttgtaaggcttca 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space: 377316
Effective search space used: 377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
