Query= MSMg01no390_n22.b1 MSMg01no390_n22.b1 CHROMAT_FILE:
MSMg01no390_n22.b1 PHD_FILE: MSMg01no390_n22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:55 2005
(570 letters)
>mm_chr7_123193232_123194201
Length = 970
Score = 1079 bits (558), Expect = 0.0
Identities = 567/570 (99%)
Strand = Plus / Plus
Query: 1 gaattctgtgattgttacccactgtattctagacttcagtgtgacactgagacaactgat 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattctgtgattgttagccactgtattctagacttcagtgtgacactgagacaactgat 260
Query: 61 ttctgatcctatgcaacctactgttttctctttctggatgcctttagttccagacactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctgatcctatgcaacctactgttttctctttctggatgcctttagttccagacactct 320
Query: 121 ttcaattttttaatccccatttggttctctattctctttgctggaattctacagatcagc 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ttcaattttttaatccccatttggttctctattctctttgctgaaattctacagatcagc 380
Query: 181 tgttggaacttctaaaatgactgtctgaaatgtgagccgcctctttgtttcccctgtcct 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 tgttggaacttctaaaatgactgtctgaaatgtgaaccgcctctttgtttcccctgtcct 440
Query: 241 taacttcacctttgaatccaggagcttctgagaaggctgtcttactcttacagaaggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taacttcacctttgaatccaggagcttctgagaaggctgtcttactcttacagaaggaca 500
Query: 301 catgtccttaaagactcttgactgccacatctctacacttcctccttctgaaggtggcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catgtccttaaagactcttgactgccacatctctacacttcctccttctgaaggtggcca 560
Query: 361 tcatgccttgagaggcaaaaacaaaaaaccatttaagtacaaggatgaaaaggtaatttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcatgccttgagaggcaaaaacaaaaaaccatttaagtacaaggatgaaaaggtaatttc 620
Query: 421 aaaaacatataaaactattcccagcacagaacaagaatgctacaaatatttgtaaaacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaacatataaaactattcccagcacagaacaagaatgctacaaatatttgtaaaacaa 680
Query: 481 aaacttaactgaataatgatagtggtcctgttgaaggataaagtctaagactttaggggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaacttaactgaataatgatagtggtcctgttgaaggataaagtctaagactttaggggc 740
Query: 541 attactgcacttatgctagcctgaacttca 570
||||||||||||||||||||||||||||||
Sbjct: 741 attactgcacttatgctagcctgaacttca 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_n22.g1 MSMg01no390_n22.g1 CHROMAT_FILE:
MSMg01no390_n22.g1 PHD_FILE: MSMg01no390_n22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:55 2005
(415 letters)
>mm_chr7_123377461_123378273
Length = 813
Score = 721 bits (373), Expect = 0.0
Identities = 402/415 (96%), Gaps = 7/415 (1%)
Strand = Plus / Minus
Query: 1 tggacaattttagaggcagatactatcgtttacattttattgatgaggcagttgagctgt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 465 tggacaattttagaggcagatactatcgtttacattttattgatgaagcagttgagctgt 406
Query: 61 taggaattattttgattttgtttgcctctccgagaggcaaaataattatcaaaaattatt 120
||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||
Sbjct: 405 taggaattattttgattttgtttgcctcttggagaggc-aaacaattatcaaaaattatt 347
Query: 121 ttgattttgtttgcctcttggaaaccaccatttgagagcctctaaattcaagtttcctca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttgattttgtttgcctcttggaaaccaccatttgagagcctctaaattcaagtttcctca 287
Query: 181 aatatgtttgtgtacccttcttcattggcctgttctgctgttgtaggggaaataaggtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 aatatgtttgtgtacccttcttcattggcctgttctgctgttgtaggggaaataaggtat 227
Query: 241 aaagctgtaggatgttcttcttttttttttttggtttttcgagacagggtttctctgtgt 300
||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 226 aaagctgtaggatgttctt------tttttttggtttttcgagacagggtttctctgtgt 173
Query: 301 agccctggctgtcctggaactcactctgtagactaggctggccttgaactcagaaatcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 agccctggctgtcctggaactcactctgtagactaggctggccttgaactcagaaatcca 113
Query: 361 cctgcctctgcctcccaagtgctgggattaaaggcgtgtgccaccacgcccagct 415
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 112 cctgcctctgcctcccaagtgctgggattaaaggtgtgcgccaccacgcccagct 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 813
Length adjustment: 9
Effective length of query: 406
Effective length of database: 804
Effective search space: 326424
Effective search space used: 326424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
